Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | ABRMM499-07.COI-5P | GenBank Accession: | JF457069 |
|---|---|---|---|
| Primers Forward: | VF1_t1 (TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG, VF1d_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG, LepF1_t1:TGTAAAACGACGGCCAGTATTCAACCAATCATAAAGATATTGG, VF1i_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCAIAAIGAIATIGG) | Primers Reverse: | VR1_t1 (CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA, VR1d_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA, LepR1_t1:CAGGAAACAGCTATGACTAAACTTCTGGATGTCCAAAAAATCA, VR1i_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGICCIAAIAAICA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| ACCCTGTACCTATTGTTTGGGGCATGAGCTGGGATAGTGGGCACAGCCCTAAGTATCCTGATTCGAGCAGAACTGGGACAACCCGGTGCCTTATTAGGTGATGATCAGATCTATAATGTGATTGTGACTGCCCATGCATTTGTAATAATTTTCTTCATAGTGATACCAATAATGATTGGAGGCTTTGGAAACTGACTCGTACCCCTAATAATCGGAGCCCCTGATATAGCATTCCCACGAATAAATAATATAAGCTTCTGACTTCTACCACCCTCATTTCTCCTGTTACTGGCATCATCTATAGTAGAAGCAGGAGCAGGTACTGGTTGAACTGTATACCCCCCATTAGCTGGTAACTTAGCACATGCTGGAGCGTCAGTAGATCTTACTATTTTTTCTCTCCACTTAGCTGGTGTATCCTCAATTCTAGGAGCAATTAACTTTATTACAACTATTATTAATATGAAACCACCGGCTATAACACAGTATCAAACCCCATTATTCGTATGATCAGTCCTCATTACAGCTGTACTCCTACTTTTATCCCTACCAGTTCTGGCCGCAGGAATTACTATACTTTTAACAGACCGAAACCTGAACACAACTTTCTTTGACCCTGCTGGAGGTGGTGACCCTATTCTATATCAACATCTATTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 657 bp | ||
| Sequence Upload Date: | 2007-04-16 | ||
Attribution
| Specimen Depository: | Royal Ontario Museum |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | Fitzhenry, A; Miller, JR |
| Specimen Identification: |
Identifiers
| Process ID: | ABRMM499-07 | Sample ID: | ROM JM40 | |||
|---|---|---|---|---|---|---|
| Record Created: | Museum ID: | |||||
| Collection Code: | MAMM | Field ID: | JM40 | |||
| Deposited In: | Royal Ontario Museum | |||||
| Associated Datasets: | DS-EBACMAMM | Mammalia for eDNA Detection | |||||
| Specimen Linkout: | ||||||
| Checksum: | eab8d3ceadd27414a73f4466086b894e | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Neotominae |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Mammalia | Genus: | Peromyscus |
| Order: | Rodentia | Species: | Peromyscus maniculatus |
| Family: | Cricetidae | Scientific Name Authorship: | Wagner, 1845 |
| BIN ID: | BOLD:AAA3959 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | M | |
| Brief Note: | Life Stage: | I | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Canada (CA) | Collection Date Start: | 1995-09-04 |
|---|---|---|---|
| Province/State: | Ontario | Collection Date End: | |
| Region/County: | Coord. Source: | ||
| Sector: | Ranger Lake, Ministry Of Natural Resources Station | Coord. Accuracy: | |
| Exact Site: | Elevation: | ||
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 46.883 | Depth: | |
| Longitude: | -83.667 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Fitzhenry, A; Miller, JR | ||
| Collection Note: | |||
Ecology
| Realm: | Nearctic |
|---|---|
| Biome: | |
| Ecoregion: | Eastern_Canadian_Forest-Boreal_transition |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/ABRMM499-07 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AABRMM499-07&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AABRMM499-07&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJ0CvL1NbG01DUwt87JzM0sSU0BAMZ-C00=?length=1