Collection Site(s)
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Sequence: 16S
| Sequence ID: | ANNMO523-20.16S | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | 16Sar-L (CGCCTGTTTATCAAAAACAT) LepF1 (ATTCAACCAATCATAAAGATATTGG, LCO1490:GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | 16Sbr-H (CCGGTCTGAACTCAGATCACGT) LepR1 (TAAACTTCTGGATGTCCAAAAAATCA, HCO2198:TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| CGCCTCCTAACTTTGGGAGGTCGAGCCTGCCCACTGATGAATTAAAGGGCCGTGGTATACTGACCATGCGAAGGTAGCATAATCATTAGCCTTTTGATTTGAGGCTGGAATGAATGGTTTGACGAGAGATGGTCTGTCTCTTCGATTAAATTGAAGTTAATCTTTAAGTGAAAAAGCTTAAATGTACTTGGAGGGCGATAAGACCCTATAGATCTTTACATTTAATTCTTTTGTCTTGCGGTAGGTAATTAGACAGAGTAAAGCAATGTTCGGTTGGGGCGACGGTAAGAACAGAATAAACACTTACAACATAAACACATCAATAAATGACCATTGATCCTTAGATGAATAAAGACCAAGTTACCTTAGGGATAACAGCGTAATTCTTTTTGAGAGTTCAAATCGACAAAAGAGTTTGCGACCTCGATGTTGGTTCAGGGACCCTACTCGGTGCAGCAGCCTAGAGAGGCAGTCTGTTCGACTGTTAAACCCCT | |||
| Locus: | 16S | ||
| Nucleotides: | 494 bp | ||
| Sequence Upload Date: | 2020-04-28 | ||
Sequence: COI-5P
| Sequence ID: | ANNMO523-20.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | 16Sar-L (CGCCTGTTTATCAAAAACAT) LepF1 (ATTCAACCAATCATAAAGATATTGG, LCO1490:GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | 16Sbr-H (CCGGTCTGAACTCAGATCACGT) LepR1 (TAAACTTCTGGATGTCCAAAAAATCA, HCO2198:TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| TACCTTATACTTAGTATTTGGGGCATTTTCAGGCATGGTTGGAACTGCTTTAAGTATGTTAATAAGATTAGAATTAGCAGCTCCAGGAGCAATGTTCGGGGACGACCATTTATATAATGTTATTGTAACTGCTCATGCATTTGTAATGATATTTTTCTTAGTAATGCCAGTATTAATAGGAGGTTTCGGTAATTGATTTGTTCCACTTTATATAGGGGCACCAGATATGGCTTTTCCAAGATTAAATAACCTTAGCTTTTGGTTATTACCCCCAGCTTTACTATTATTATTAGGTTCATCATTAGTAGAACAAGGTGCAGGAACAGGATGGACCGTATATCCGCCGCTTTCAGCTGCACAAGCCCATTCGGGGCCATCGGTAGACATGGCCATCTTCAGTTTACACTGTGCCGGAGCTTCATCAATAATGGGGGCCATAAATTTTATTACAACTATAATAAATATGAGAACTCCAGGTATGACTTTTGATAAATTACCTCTATTTGTTTGATCAGTATTTATAACAGCATTTTTATTATTACTATCCTTACCTGTACTAGCAGGTGCTATAACTATGTTATTAACTGATAGAAATTTTAATACCACTTTTTTTGACCCAGCAGG | |||
| Locus: | COI-5P | ||
| Nucleotides: | 624 bp | ||
| Sequence Upload Date: | 2020-04-01 | ||
Attribution
| Specimen Depository: | Wheaton College, Wheaton, IL. |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Nadine Rorem |
| Collectors: | Nadine Rorem |
| Specimen Identification: | Nadine Rorem |
Identifiers
| Process ID: | ANNMO523-20 | Sample ID: | B7-DPR-GENO2-1 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2020-02-18 | Museum ID: | ||||
| Collection Code: | Field ID: | Nadine_Rorem | ||||
| Deposited In: | Wheaton College, Wheaton, IL. | |||||
| Associated Datasets: |
DS-L3GL | Great Lakes DNA barcode Level 3 database DS-NISEURE | Assemble and audit of a DNA barcode reference library for marine invertebrate NIS occurring in European Coastal Regions - Grade E |
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| Specimen Linkout: | ||||||
| Checksum: | 37aa5cab698b58a7ee94094cd677e763 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Cnidaria | Tribe: | |
| Class: | Hydrozoa | Genus: | Cordylophora |
| Order: | Anthoathecata | Species: | Cordylophora caspia |
| Family: | Cordylophoridae | Scientific Name Authorship: | |
| BIN ID: | BOLD:AAR9095 | Subspecies: | |
| Identification Method: | Morphology | ||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | |||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2019-06-27 |
|---|---|---|---|
| Province/State: | Illinois | Collection Date End: | |
| Region/County: | DesPlaines River | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Brandon Dam, Joliet, IL | Elevation: | |
| Habitat: | aquatic, fresh water | Elevation Accuracy: | |
| Latitude: | 41.4989 | Depth: | |
| Longitude: | -88.1027 | Depth Accuracy: | |
| Sampling Protocol: | collected from rokcs, mussels or hard substrate | ||
| Collectors: | Nadine Rorem | ||
| Collection Note: | |||
Ecology
| Realm: | Nearctic |
|---|---|
| Biome: | Temperate_Grasslands_Savannas_&_Shurblands_simplify-0.001_buffered-0.018 |
| Ecoregion: | Central_US_forest-grasslands_transition |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/ANNMO523-20 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AANNMO523-20&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AANNMO523-20&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXL08_P1NzUy1jUysM7JzM0sSU0BAMZwC0Y=?length=2