Collection Site(s)



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Sequence: ITS

Sequence ID: BARLI007-11.ITS GenBank Accession:
Primers Forward: ITS1-F (CTTGGTCATTTAGAGGAAGTAA) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC)
Sequence Run Site: Royal Botanic Garden Edinburgh
CGAGAGAGGGGCCCCGCGCTCCCGGGGGTTTCGGCCTCCACCTCTTCACCCATTGCGTATCTACCTTTGTTGCTTTGGCGGGCCATGGGGTTCGCCTCACGCCGGCCTTCGGGCTGGTGAGCGTCCGTCAGAGGCCCTTTAAAACCCTGTTTATAGTGATGTCCGAGTAAAACACAAATAGTAAAAACTTTCAACAACGGATCTCTTGGTTCCAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACATCCCTCAAGCGTAGCTTGGTATTGGGTCTCGCCCCCCGGGCGTGCCCGAAAAGCAGTGGCGGTCCGGAGCGACTTTGAGCGTAGTAAAATATCATCCCGCTTTGAAAGATCGTCTCTGGGCCTGCCAGAAACCCCAAATATTTTCATA
Locus: ITS
Nucleotides: 492 bp
Sequence Upload Date: 2011-03-06

Attribution

Specimen Depository: Royal Botanic Garden Edinburgh
Sequencing Center: Royal Botanic Garden Edinburgh
Photography:
Collectors: B Benfield
Specimen Identification:

Identifiers

Process ID: BARLI007-11 Sample ID: EDNA09-02084
Record Created: 2011-02-03 Museum ID: s.n.
Collection Code: Usnea 028 Field ID: s.n.
Deposited In: Royal Botanic Garden Edinburgh
Associated Datasets:
Specimen Linkout:
Checksum: f5361d44fdc1f5a1414aa670402c7233

Taxonomy

Kingdom: Fungi Subfamily:
Phylum: Ascomycota Tribe:
Class: Lecanoromycetes Genus: Usnea
Order: Lecanorales Species: Usnea flammea
Family: Parmeliaceae Scientific Name Authorship: Stirt.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2009-07-01
Province/State: England Collection Date End:
Region/County: South Devon Coord. Source: SX574696
Sector: Coord. Accuracy:
Exact Site: Burratar Reservoir, W Devon Elevation: 260
Habitat: Elevation Accuracy:
Latitude: 50.508 Depth:
Longitude: -4.011 Depth Accuracy:
Sampling Protocol:
Collectors: B Benfield
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Celtic_broadleaf_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BARLI007-11
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABARLI007-11&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABARLI007-11&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJyDPLxNDAw1zU0tM7JzM0sSU0BAMVCCzQ=?length=1

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