Collection Site(s)



Legend
1+
10+
100+
1000+
10000+

Sequence: ITS

Sequence ID: BARLI013-11.ITS GenBank Accession:
Primers Forward: ITS1-F (CTTGGTCATTTAGAGGAAGTAA) Primers Reverse: ITS4A (CGCCGTTACTGGGGCAATCCCTG)
Sequence Run Site: Royal Botanic Garden Edinburgh
CGAGAGAGGGGCTTCGCGCTCCCGGGGGTTTCGGCCTCCACCTCTTCACCCATTGCGTACATACCTTTGTTGCTTTGGCGGGCCATGGGGTTCGCCTCACGCCGGCCTCCGCGCTGGTGAGCGCCCGTCAGAGGCCCTCAAAATTCTGTTCATAGTGACGTCCGAGTTAAACACAAATAGTTAAAAACTTTCAACAACGGATCTCTTGGTTCCAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCGTAGCTTGGTATTGGGTCTCGCCCCCCGGGCGTGCCCGAAAAGCAGTGGCGGTCCGGAGCGACTTTAAGCGTAGTAAATTTTCATCCCGCTTTGAAAGATCGCCTCGGGCCTGCCAGAAACCCAAAATTTTTCATA
Locus: ITS
Nucleotides: 490 bp
Sequence Upload Date: 2011-03-06

Attribution

Specimen Depository: Royal Botanic Garden Edinburgh
Sequencing Center: Royal Botanic Garden Edinburgh
Photography:
Collectors: P Harrold
Specimen Identification:

Identifiers

Process ID: BARLI013-11 Sample ID: EDNA10-00742
Record Created: 2011-02-03 Museum ID: 09008c
Collection Code: Usnea 083c Field ID: 09008c
Deposited In: Royal Botanic Garden Edinburgh
Associated Datasets:
Specimen Linkout:
Checksum: 5aeb7373188c1d77b35ad3989d2c72b3

Taxonomy

Kingdom: Fungi Subfamily:
Phylum: Ascomycota Tribe:
Class: Lecanoromycetes Genus: Usnea
Order: Lecanorales Species: Usnea fragilescens
Family: Parmeliaceae Scientific Name Authorship: Hav. ex Lynge
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2009-09-15
Province/State: Scotland Collection Date End:
Region/County: West Inverness Coord. Source: NM6009961126
Sector: Coord. Accuracy:
Exact Site: Glen Borrodale, Ardnamurchan Elevation: 5
Habitat: Elevation Accuracy:
Latitude: 56.68 Depth:
Longitude: -5.917 Depth Accuracy:
Sampling Protocol:
Collectors: P Harrold
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: North_Atlantic_moist_mixed_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BARLI013-11
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABARLI013-11&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABARLI013-11&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJyDPLxNDA01jU0tM7JzM0sSU0BAMUfCzE=?length=1

AJAX URLs


                

            

        

    






    


    

        

            

                
© 2024 BOLDSYSTEMS