Collection Site(s)



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Sequence: ITS

Sequence ID: BARLI061-11.ITS GenBank Accession:
Primers Forward: ITS1-F (CTTGGTCATTTAGAGGAAGTAA) Primers Reverse: ITS4A (CGCCGTTACTGGGGCAATCCCTG)
Sequence Run Site: Royal Botanic Garden Edinburgh
CGAGAGAGGGGCTTCGCGCTCCCGGGGGTTTCGGCCTCCACCTCTTCACCCATTGCGTATCTACCTATGTTGCTTTGGCGGGCCATGGGGTTCGCCTCGCGTTGGCCTTCGGGCTGGTGAGCGCCCGTCAGAGGCCCTTTAAAAACCTTTTTTTTAGTGATGTCCGAGTAAAACACAAATAGTAAAAACTTTCAACAACGGATCTCTTGGTTCCAGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCGTAGCTTGGTATTGGGTCTCGCCCCTCGGGCGTGCCCGAAAAGCAGTGGCGGTCCGGAGCGACTTTGAGCGTAGTAAATTATCATCCCGCTTTGAAAGATCGTCTCTGGGCTTGCCAGAAACCCCAAATCTTCATA
Locus: ITS
Nucleotides: 491 bp
Sequence Upload Date: 2011-03-06

Attribution

Specimen Depository: Royal Botanic Garden Edinburgh
Sequencing Center: Royal Botanic Garden Edinburgh
Photography:
Collectors: Peter Lambley, Ray Woods, Stephen Ward
Specimen Identification:

Identifiers

Process ID: BARLI061-11 Sample ID: EDNA09-01126
Record Created: 2011-02-03 Museum ID: s.n.
Collection Code: Usnea 003 Field ID: s.n.
Deposited In: Royal Botanic Garden Edinburgh
Associated Datasets:
Specimen Linkout:
Checksum: 8a3f5933ca9db96c553a9ddf5c2bceb4

Taxonomy

Kingdom: Fungi Subfamily:
Phylum: Ascomycota Tribe:
Class: Lecanoromycetes Genus: Usnea
Order: Lecanorales Species: Usnea esperantiana
Family: Parmeliaceae Scientific Name Authorship: P. Clerc
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Ireland (IE) Collection Date Start: 2009-04-23
Province/State: Collection Date End:
Region/County: Clare Coord. Source: R6714482958
Sector: Coord. Accuracy:
Exact Site: Bealkelly Wood, Shores of Lough Derg Elevation: 1
Habitat: Elevation Accuracy:
Latitude: 52.897 Depth:
Longitude: -8.489 Depth Accuracy:
Sampling Protocol:
Collectors: Peter Lambley, Ray Woods, Stephen Ward
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Celtic_broadleaf_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BARLI061-11
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABARLI061-11&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABARLI061-11&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJyDPLxNDAz1DU0tM7JzM0sSU0BAMVICzQ=?length=1

AJAX URLs


                

            

        

    






    


    

        

            

                
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