Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: BBYUK075-10.ITS2 GenBank Accession: MG219576
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) MatK-1RKIM-f (ACCCAGTCCATCTGGAAATCTTGGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
TGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATCCGGCCGAGGGCACGCCTGCCTGGGCGTCACGCATCGCGTCGCCCCCACCAAACATCCCCTTGGGGATACATGGCATCGGGGCGGAGATTGGCCTCCCATTCTTTTGGTGTGGTTGGCCTAAACCGGAGTCCCCTTCGGTGGACGCACGACTAGTGGTGGTTGAAAAGACCCTCGTCCTGTGTCGTGCGTCCTAAGCTGTGAGGGATGTGCTCGATAAAGACCCCAATGTGTCGTCCTGCGACGATGCTTCGACCGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAA
Locus: ITS2
Nucleotides: 347 bp
Sequence Upload Date: 2016-05-24

Sequence: matK

Sequence ID: BBYUK075-10.matK GenBank Accession: MG225230
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) MatK-1RKIM-f (ACCCAGTCCATCTGGAAATCTTGGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
AAATTCAAAGAAAGCCAGTTCTTCTTTTTCAAAAAGAAATCACAGACTATTCTTCTTCCTATATACTTCTCANGTATGTGAATATGAATCTGGCTTCCTCTTTCTCCGTAACCAATCTTCTCACTTACGATCAACATCTTCTGGAGCCCTTATTGAACGAATATATTTCTATGGAAAAATAGAGCATCTTGTAGAAGTCTTTGCCAGGGCTTTTCAAGTGAATTTATGGTTGTTCAAAGATCCTTTCATGCATTATGTTAGGTATCAAGGAAAATCAATTCTTGCTTCAAAAGGGACATTTCTTTTGATGAATAAATGGAAATATTACTTTGTCAATTTCTGGAAATCTTATTTTTACCTGTGGTCTCAACCAGGAAGGATTTATATAAACCAATTATCCAATCATTCCCTTGACTTTATGGGTTATCGTTCAAGTGTGCGGCTAAAGCCTTCAATGGTACGCAGTCAAATGCTAGAAAATGCATTTCTAATCGAAAATGCTATTAATAAGTTTGAGACTATTGTTCCAATTATGCCAATGATTGGATCATTGGCTAAATCGAAATTTTGTAACGCATTGGGGCATCCTATTGGTAAGGCGATTTGGGCCGATTTCTCAGATTCTGATATTATTGACCGCTTTGGGCATATATACAGAAATCTTTCTCATTATCATAGTGGATCTTCAAAAAAAAAGAGTTTGTATC
Locus: matK
Nucleotides: 707 bp
Sequence Upload Date: 2016-05-24

Sequence: rbcLa

Sequence ID: BBYUK075-10.rbcLa GenBank Accession: MG223856
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) MatK-1RKIM-f (ACCCAGTCCATCTGGAAATCTTGGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
agtgttggattcaaagctggtgttaaagattataaattgacttattatactcctgactatgaaaccaaggatactgatattttggcagcatttcgagtaactcctcaacctggagttccgcctgaagaagcaggggccgcagtagctgccgaatcttctactggtacatggacaactgtgtggaccgatggacttacgagccttgatcgttacaaagggcgatgctatggaatcgagcctgttcctggagaagaaaatcaatttattgcttatgtagcttacccattagacctttttgaagaaggttctgttactaacatgtttacttccattgtaggtaatgtatttgggttcaaagccctgcgtgctctacgtctggaagatttgcgaatccctactgcgtatgttaaaactttccaaggtccgcctcacggcatccaagttgagagagataaattgaacaagtatggtcgtcccctgttgggatgtactattaaacctaaattggggttatccgctaaaaactacggtagagctgtttatgaatgtctt
Locus: rbcLa
Nucleotides: 552 bp
Sequence Upload Date: 2016-05-24

Attribution

Specimen Depository: Research Collection of B. A. Bennett
Sequencing Center: Centre for Biodiversity Genomics
Photography: Bruce Bennett,None
Collectors: B.A. Bennett
Specimen Identification: Bruce A. Bennett

Identifiers

Process ID: BBYUK075-10 Sample ID: BAB-0578
Record Created: 2010-02-02 Museum ID: BAB-0578
Collection Code: 97-146 Field ID: BAB-0578
Deposited In: Research Collection of B. A. Bennett
Associated Datasets: DS-VASCAN | A DNA barcode library for the vascular plants of Canada
Specimen Linkout:
Checksum: 423a071ba0f4ea73d9dbde7522f180dc

Taxonomy

Kingdom: Plantae Subfamily: Cichorioideae
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Hieracium
Order: Asterales Species: Hieracium triste
Family: Asteraceae Scientific Name Authorship: Willd. ex Spreng.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes: formerly: Hieracium gracile
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Canada (CA) Collection Date Start: 1996-07-02
Province/State: Yukon Collection Date End:
Region/County: Watson Lake, wetland just SE of Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Elevation: 2250
Habitat: Pinus contorta forest, open, dry. Elevation Accuracy:
Latitude: 60.051 Depth:
Longitude: -128.644 Depth Accuracy:
Sampling Protocol:
Collectors: B.A. Bennett
Collection Note:

Ecology

Realm: Nearctic
Biome:
Ecoregion: Watson_Highlands_taiga

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BBYUK075-10
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABBYUK075-10&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABBYUK075-10&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJyigz1NjA31TU0sM7JzM0sSU0BAMazC0s=?length=3

AJAX URLs


                

            

        

    






    


    

        

            

                
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