Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | BKMAM039-11.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | VF1_t1 (TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG, VF1d_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG, LepF1_t1:TGTAAAACGACGGCCAGTATTCAACCAATCATAAAGATATTGG, VF1i_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCAIAAIGAIATIGG) | Primers Reverse: | VR1_t1 (CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA, VR1d_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA, LepR1_t1:CAGGAAACAGCTATGACTAAACTTCTGGATGTCCAAAAAATCA, VR1i_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGICCIAAIAAICA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| CCTATATTTACTATTCGGAGCCTGAGCAGGAATAGTAGGTACTGCACTAAGCATTTTAATTCGAGCAGAATTAGGTCAACCAGGTGCACTTTTAGGAGATGACCAAATCTATAATGTTATCGTAACTGCCCATGCATTTGTTATAATTTTCTTCATAGTCATACCAATAATAATTGGAGGATTTGGAAACTGACTCGTTCCACTTATAATTGGGGCCCCAGATATAGCATTCCCGCGAATAAACAATATAAGTTTCTGACTCTTGCCACCATCATTCCTCCTTCTCCTAGCGTCATCAATAGTAGAAGCAGGAGCAGGAACAGGATGAACAGTCTACCCCCCTCTAGCCGGAAATCTAGCCCATGCAGGGGCATCAGTAGACCTGACCATTTTCTCACTTCATTTGGCTGGAGTGTCATCTATTTTAGGCGCAATCAATTTTATTACTACCATTATCAACATGAAACCCCCAGCCATAACACAATACCAAACTCCACTATTTGTCTGATCCGTTCTTATTACAGCTGTGCTACTACTATTATCACTACCAGTGCTAGCAGCAGGCATTACCATACTATTAACAGACCGCAACCTAAATACAACTTTCTTTGATCCCGCTGGAGGAGGGGACCCTATCCTCTACCAACATTTATTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 655 bp | ||
| Sequence Upload Date: | 2012-03-23 | ||
Attribution
| Specimen Depository: | Institute of Biodiversity and Ecosystem Research, Sofia |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | None |
| Collectors: | N.Atanasov |
| Specimen Identification: |
Identifiers
| Process ID: | BKMAM039-11 | Sample ID: | mambg039 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2011-12-20 | Museum ID: | mambg039 | |||
| Collection Code: | Field ID: | mambg039 | ||||
| Deposited In: | Institute of Biodiversity and Ecosystem Research, Sofia | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | be09ad61891086781e4df81c998a7ff7 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Murinae |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Mammalia | Genus: | Mus |
| Order: | Rodentia | Species: | Mus musculus |
| Family: | Muridae | Scientific Name Authorship: | Linnaeus, 1758 |
| BIN ID: | BOLD:ABV9927 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | M | |
| Brief Note: | Life Stage: | A | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Bulgaria (BG) | Collection Date Start: | 2011-08-29 |
|---|---|---|---|
| Province/State: | Collection Date End: | ||
| Region/County: | Haskovo | Coord. Source: | |
| Sector: | Stambolovo | Coord. Accuracy: | |
| Exact Site: | Dolno Cherkoviste | Elevation: | 195 |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 41.638 | Depth: | |
| Longitude: | 25.739 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | N.Atanasov | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Rodope_montane_mixed_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/BKMAM039-11 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABKMAM039-11&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABKMAM039-11&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXLy9nX0NTC21DU0tM7JzM0sSU0BAMVsCzc=?length=1