Collection Site(s)
Legend
1+
10+
100+
1000+
10000+
Sequence: COI-5P
| Sequence ID: | BLPAA17251-20.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | VF2_t1 (TGTAAAACGACGGCCAGTCAACCAACCACAAAGACATTGGCAC, FishF2_t1:TGTAAAACGACGGCCAGTCGACTAATCATAAAGATATCGGCAC) | Primers Reverse: | FishR2_t1 (CAGGAAACAGCTATGACACTTCAGGGTGACCGAAGAATCAGAA, FR1d_t1:CAGGAAACAGCTATGACACCTCAGGGTGTCCGAARAAYCARAA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| CCTTCTCATTCGGGCGGAACTAAGCCAGCCAGGCGCTCTCCTCGGAGACGACCAAATTTACAATGTTATTGTTACCGCACACGCCTTTGTAATAATTTTCTTTATAGTAATGCCAATTATGATTGGTGGCTTTGGAAACTGACTTATCCCCCTTATGATCGGAGCCCCCGACATGGCATTTCCCCGGATGAATAATATGAGCTTTTGACTCCTTCCTCCTTCATTCCTCCTTCTACTAGCCTCCTCCGGTGTCGAGGCAGGTGCGGGGACAGGATGAACTGTCTACCCCCCACTATCCGGCAACCTGGCCCACGCAGGGGCTTCTGTAGATCTAACCATCTTCTCCCTCCACCTAGCAGGTATCTCCTCTATTCTAGGGGCAATTAATTTTATTACCACAATTATTAACATAAAACCACCTGCCATCTCTCAATACCAAACCCCCCTCTTCGTATGGGCCGTGCTTATTACTGCCGTCCTACTACTTTTATCCCTCCCTGTACTAGCTGCAGGAATTACCATGCTCCTGACCGATCGAAATTTAAACACCACTTTCTTTGACCCTGCAGGAGGAGGTGACCCTATTCTATA | |||
| Locus: | COI-5P | ||
| Nucleotides: | 591 bp | ||
| Sequence Upload Date: | 2020-03-03 | ||
Attribution
| Specimen Depository: | Universidad de Costa Rica |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | Arturo Angulo, Jorge San Gil, Omar Dominguez, Eloisa Torres, Francisco Martinez, Frank Joyce, Jake Lowenstein, Yelba Vega, Gilbert Ampie |
| Specimen Identification: | Arturo Angulo |
Identifiers
| Process ID: | BLPAA17251-20 | Sample ID: | 19-BMACGFishes-247 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2020-01-16 | Museum ID: | CTP-268 | |||
| Collection Code: | MZUCR-Fishes | Field ID: | 268 | |||
| Deposited In: | Universidad de Costa Rica | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | 839b5508d7c54729197de0294a1ccadd | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Pomacentrinae |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Actinopterygii | Genus: | Microspathodon |
| Order: | Gobiiformes | Species: | Microspathodon dorsalis |
| Family: | Pomacentridae | Scientific Name Authorship: | Gill, 1862 |
| BIN ID: | BOLD:AAD7585 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | Adult | |
| Detailed Notes: | Pectoral fin | ||
Collection
| Country/Ocean: | Costa Rica (CR) | Collection Date Start: | 2019-07-24 |
|---|---|---|---|
| Province/State: | Guanacaste Province | Collection Date End: | |
| Region/County: | Area de Conservacion Guanacaste | Coord. Source: | |
| Sector: | Islas Murcielago | Coord. Accuracy: | |
| Exact Site: | Bahia Murcielago, El Jardin | Elevation: | -10 |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 10.86153 | Depth: | |
| Longitude: | -85.91203 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Arturo Angulo, Jorge San Gil, Omar Dominguez, Eloisa Torres, Francisco Martinez, Frank Joyce, Jake Lowenstein, Yelba Vega, Gilbert Ampie | ||
| Collection Note: | |||
Ecology
| Realm: | |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/BLPAA17251-20 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABLPAA17251-20&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABLPAA17251-20&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXLyCXB0NDQ3MjXUNTKwzsnMzSxJTQEA2N8Lkw==?length=1