Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | BMAR2952-22.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | VF2_t1 (TGTAAAACGACGGCCAGTCAACCAACCACAAAGACATTGGCAC, FishF2_t1:TGTAAAACGACGGCCAGTCGACTAATCATAAAGATATCGGCAC) | Primers Reverse: | FishR2_t1 (CAGGAAACAGCTATGACACTTCAGGGTGACCGAAGAATCAGAA, FR1d_t1:CAGGAAACAGCTATGACACCTCAGGGTGTCCGAARAAYCARAA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| GTATTTGGTGCTTGAGCCGGAATGGTAGGGACAGCCCTGAGCCTTCTCATTCGGGCGGAACTAAGCCAGCCAGGCGCTCTCCTCGGAGACGACCAAATTTACAATGTTATTGTTACCGCACACGCCTTTGTAATAATTTTCTTTATAGTAATGCCAATTATGATTGGTGGCTTTGGAAACTGACTTATCCCCCTTATGATCGGAGCCCCCGACATGGCATTTCCCCGGATGAATAATATGAGCTTTTGACTCCTTCCTCCTTCATTCCTCCTTCTACTAGCCTCCTCCGGTGTCGAGGCAGGTGCGGGGACAGGATGAACTGTCTACCCCCCACTATCCGGCAACCTGGCCCACGCAGGGGCTTCTGTAGATCTAACCATCTTCTCCCTCCACCTAGCAGGTATCTCCTCTATTCTAGGGGCAATTAATTTTATTACCACAATTATTAACATAAAACCACCTGCCATCTCTCAATACCAAACCCCCCTCTTCGTATGGGCCGTGCTTATTACTGCCGTCCTACTACTTTTATCCCTCCCTGTACTAGCTGCAGGAATTACCATGCTCCTGACCGATCGAAATTTAAACACCACTTTCTTTGACCCTGCAGGAGGAGGTGACCCTATTCTATACCAACACTTA | |||
| Locus: | COI-5P | ||
| Nucleotides: | 642 bp | ||
| Sequence Upload Date: | 2023-05-10 | ||
Attribution
| Specimen Depository: | Universidad de Costa Rica |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | Arturo Angulo, Jorge San Gil, Leonardo Chacon, Omar Valencia, Andre Chavez, Paola Palacios, Eloisa torres, Yareli Lopez, Yelba Vega y Gilbert Ampie |
| Specimen Identification: | Arturo Angulo Sibaja |
Identifiers
| Process ID: | BMAR2952-22 | Sample ID: | 21-BMACGFJJ-514 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2022-11-01 | Museum ID: | 134 | |||
| Collection Code: | MZUCR-ICT | Field ID: | 134-67349-514 | |||
| Deposited In: | Universidad de Costa Rica | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | cce5c60b254aa2ec0479089910893026 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Pomacentrinae |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Actinopterygii | Genus: | Microspathodon |
| Order: | Gobiiformes | Species: | Microspathodon dorsalis |
| Family: | Pomacentridae | Scientific Name Authorship: | Gill, 1862 |
| BIN ID: | BOLD:AAD7585 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | U | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | U | |
| Brief Note: | Life Stage: | Adult | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Costa Rica (CR) | Collection Date Start: | 2021-11-29 |
|---|---|---|---|
| Province/State: | Guanacaste Province | Collection Date End: | |
| Region/County: | Area de Conservacion Guanacaste | Coord. Source: | |
| Sector: | Cuajiniquil | Coord. Accuracy: | |
| Exact Site: | Los Loros/Isla Dispensa | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 11.003 | Depth: | |
| Longitude: | -85.748 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Arturo Angulo, Jorge San Gil, Leonardo Chacon, Omar Valencia, Andre Chavez, Paola Palacios, Eloisa torres, Yareli Lopez, Yelba Vega y Gilbert Ampie | ||
| Collection Note: | |||
Ecology
| Realm: | Neotropic |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/BMAR2952-22 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABMAR2952-22&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABMAR2952-22&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXLydQwysjQ10jUyss7JzM0sSU0BAMSWCyk=?length=1