Specimen Images



Sequence: ITS2

Sequence ID: BRYCA029-15.ITS2 GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
TCTTGGCTCTCGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGCGAATCATCGAGTTTTTGAACGCAAGTTGCGCCCGAGGCTTGTCCCGAGGGCATGTCTGCCTGAGCGTCACCGCTCGACCCACCCATCCGTCCCATTCGTTTTGGGGCGGTTCTCGCGTGGAACTGGTCGTCCGAGGGGGCGGAGCTGTCCGCCATCGGTCGGCTGAAATGTATGCTGTCCGGGCGCCGTGGCGAGGGACCGTGACCAGGTGATCCGCCGGCCGCCCTTCGTGGGAAGGCCGACGCGGAGGCGTGCGCGGTCTCGAAAGAGTTTCCTTCGTCCTGTCGTCCGCGGCGGAAAGCAGGCCTTTTCGAACATCTGATGCTGACCTCAGATCAGGCAAGAGCACCCGCTGAATTTAA
Locus: ITS2
Nucleotides: 429 bp
Sequence Upload Date: 2024-12-11

Sequence: rbcLa

Sequence ID: BRYCA029-15.rbcLa GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
AGGTAGTGGATTTAAAGCTGGTGTTAAAGATTACAGGTTGACTTATTACACCCCGGAGTATGTTGTCAAAGATACCGACATTTTGGCAGCATTTCGAATGACTCCTCAACCTGGAGTACCACCCGAGGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCCACCGGTACATGGACTACCGTTTGGACCGATGGACTTACCAGTCTTGATCGTTATAAGGGTCGATGCTATGATATCGAGCCTGTAGCTGGAGAAGAAAATCAATATATTGCTTATGTTGCTTATCCTTCAGATTTATTCGAAGAAGGTTCTGTTACCAACTTATTTACTTCTATTGTAGGTAATGTTTTTGGATTCAAAGCTCTACGAGCTCTACGTCTAGAGGATTTACGGATTCCCCCATCTTATACTAAAACTTTCCAAGGTCCACCTCATGGTATCCAAGTTGAGAGAGATAAATTAAACAAATATGGTCGTCCCCTATTGGGATGTACTATTAAACCAAAATTAGGTCTATCTGCTAAAAACTATGGCAGAGCAGTATATGAGTGTCTT
Locus: rbcLa
Nucleotides: 553 bp
Sequence Upload Date: 2019-09-20

Sequence: trnL-F

Sequence ID: BRYCA029-15.trnL-F GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
GACTTAATTCAATTGAGCCTTGGTAGAAAAACTTACCAAGTGCTAGCTTTCAGATTCAGGGAAACCTAGGTTGAAGAAGAAATAGGCGATCCTGAGCCAAATCTTGTTTTCATAACATAAATGGGATAGGTGCAGAGACTCGATGGAAGCTATCCCAACGAGAAATATTACTTTGACTTTAGATCTTATACGTTTATTTATCCAGATAAACAAATATGTTTATTTATCCAGATAAACAAATATATATATATGTATATATTTGTATATTGAAATAGATTCACCAGATAGAAATCTCGGAGATGGATTTATGATTTATTCAAAAAAAAAAATAAATAATTTTTTATTACTTCTATTTATCCATCCAAACGAAGAATCCTACCACGAATTGATCTATCAAGTGATTGAACGAGGATAAAGATAGAGTCCAGTTTTACATGTTCATTCCAACAACGATGTAAATCGTAGTAAAAAGAAAATCCGTTGGCTTTATAGTAGACCGTGAGG
Locus: trnL-F
Nucleotides: 504 bp
Sequence Upload Date: 2019-09-20

Attribution

Specimen Depository: Canadian Museum of Nature, Natural Heritage Collection
Sequencing Center: Centre for Biodiversity Genomics
Photography: CBG Photography Group
Collectors:
Specimen Identification:

Identifiers

Process ID: BRYCA029-15 Sample ID: CCDB-24813-C06
Record Created: 2015-10-07 Museum ID:
Collection Code: CANM Field ID: CCDB-24813-C06
Deposited In: Canadian Museum of Nature, Natural Heritage Collection
Associated Datasets: DS-BITSR | Verified ITS2 reference library for the bryophytes of Canada
Specimen Linkout:
Checksum: 03ab0eb1fe074d51031bc26a7920ff5b

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Sphagnopsida Genus: Sphagnum
Order: Sphagnales Species: Sphagnum contortum
Family: Sphagnaceae Scientific Name Authorship: Schultz, 1819 [Jul]
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Canada (CA) Collection Date Start:
Province/State: Ontario Collection Date End:
Region/County: Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Elevation:
Habitat: Elevation Accuracy:
Latitude: Depth:
Longitude: Depth Accuracy:
Sampling Protocol:
Collectors:
Collection Note:

Ecology

Realm:
Biome:
Ecoregion:

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BRYCA029-15
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABRYCA029-15&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABRYCA029-15&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXIKinR2NDCy1DU0tc7JzM0sSU0BAMY5C0M=?length=3

AJAX URLs


                

            

        

    






    


    

        

            

                
© 2024 BOLDSYSTEMS