Specimen Images



Sequence: ITS2

Sequence ID: BRYCA1620-16.ITS2 GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
TCTTGGCTCTTGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTTGTCCGAGGGCATTTCCGCTAGAGCGTCACCGCGCCCCCCACCGATCCACTCCCGCCGCGAGGCGCCAGTCGGGTCGAGTGCAAGTGGCCGTCCCGGCGAAGTGGCCTTCTTTCACGAGGAGGCCGTCCTTGGAAGGGTCGGCTGAAATGGATGGAATCGGGCCGCCGTGGTGACACAGTCCGCGATCGGGTGATTTTGTCGCGAGCCTCCCCCGGGAGGCTCTTGGTGAATTTTTCTAAGTGCTTGGCTGCGTCCCCCAGTTGGCTCGGGTTACCTCATGCAGGTCGAGCGCGCCCCCGCGGCGCGCGTCACGCATCAGACCTCTAATCGGAAAAGACTACCCGCTGAATTTAA
Locus: ITS2
Nucleotides: 461 bp
Sequence Upload Date: 2024-06-10

Sequence: rbcLa

Sequence ID: BRYCA1620-16.rbcLa GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
AGGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGATTAACTTATTACACTCCAGATTATCAGACTAAAGAAACTGATATTTTAGCAGCATTTCGAATGACTCCTCAACCAGGAGTACCCGCTGAAGAGGCAGGAGCTGCAGTAGCTGCGGAATCTTCCACTGGTACATGGACCACCGTTTGGACCGATGGACTTACCAGTCTTGATCGTTATAAAGGACGATGCTATGATCTTGAAGCAGTTCCTGGAGAAGAGAATCAATATATTGCTTATGTTGCTTACCCATTAGATCTATTTGAAGAAGGTTCTGTTACCAATTTATTTACTTCTATTGTTGGTAATGTTTTTGGATTTAAAGCTTTACGAGCTTTACGTCTAGAAGATTTACGTATTCCTCCAGCTTATTCCAAAACTTTCCAAGGTCCACCTCATGGTATTCAAGTTGAAAGAGATAAATTAAACAAATATGGTCGTCCATTATTAGGATGTACCATTAAGCCAAAATTGGGTTTATCTGCTAAAAACTATGGTAGAGCTGTATATGAATGTCTT
Locus: rbcLa
Nucleotides: 553 bp
Sequence Upload Date: 2019-09-20

Sequence: trnL-F

Sequence ID: BRYCA1620-16.trnL-F GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
GACTTAAATAATTTGAGCGTTAGTAGAAAAACTTACTAGATGCTAGTTTTCAGATTCAGGGAAACTTAGGTTGATAAAAATATAAGCAATCCTGAGCCAAATATTATTTCGTTTGAAAATGAAATAGGTGCAGAGACTCAATGGAAGCTATCCTAACGAATAATATTTTTAAAATTATTTAAAATTTACTTTTTAGACTTTTTAGATATTAAGCGAGGATAAAGATAGAGTCCAATTTTACATGTTAATCTTAGCAACAATTTAAATTGTAGTAGAAAGAAAATCCGTTGGCTTTATTGACCGTGAGG
Locus: trnL-F
Nucleotides: 308 bp
Sequence Upload Date: 2019-09-20

Attribution

Specimen Depository: Canadian Museum of Nature, Natural Heritage Collection
Sequencing Center: Centre for Biodiversity Genomics
Photography: CBG Photography Group
Collectors: C.D. Bird
Specimen Identification:

Identifiers

Process ID: BRYCA1620-16 Sample ID: CCDB-28095-A05
Record Created: 2016-02-24 Museum ID: 180358
Collection Code: CANM Field ID: 4635
Deposited In: Canadian Museum of Nature, Natural Heritage Collection
Associated Datasets: DS-BITSR | Verified ITS2 reference library for the bryophytes of Canada
Specimen Linkout:
Checksum: 0d48d823dab28fcf1b945b43df817bab

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Bryopsida Genus: Brachythecium
Order: Hypnales Species: Brachythecium salebrosum
Family: Brachytheciaceae Scientific Name Authorship: W. P. Schimper in B.S.G., 1853
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Canada (CA) Collection Date Start: 1960-07-30
Province/State: Alberta Collection Date End:
Region/County: Coord. Source:
Sector: Coord. Accuracy:
Exact Site: West end of Twin Lakes, 7 miles east of Elkwater Elevation:
Habitat: fallen limb of large willow, aspen woods Elevation Accuracy:
Latitude: Depth:
Longitude: Depth Accuracy:
Sampling Protocol:
Collectors: C.D. Bird
Collection Note:

Ecology

Realm:
Biome:
Ecoregion:

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BRYCA1620-16
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABRYCA1620-16&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABRYCA1620-16&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXIKinR2NDQzMtA1NLPOyczNLElNAQDP-wty?length=3

AJAX URLs


                

            

        

    






    


    

        

            

                
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