Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: BRYCA2018-19.ITS2 GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
TCTTGGCTCTTGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTCGTCCGAGGGCATTCCTGCCTGAGCGTCATCGCGCCACCCACCGAACCCTTCGGGGTCGAGTGAATCTGGCCGTCCGATCCCGTTCGGGATCGGTCGGCTGAAATTCAGAGAGTCCCGTTGCCGTGGAGACGCGGCTGCGATCAGGTGATCCGACCCTCCCTGATCAGGAGCGAGGAAGCGTGCGCAGTCCCTGTCGTCTCTCAAGCAGCATTGAATCGGGACTCGAGCAGGTCTCGCGGTCCTCGACGGTTCCGTCCAACGGAACCGTCGAACAGGCCGGGAAACAGTCGAACGCATCAGACCTCAGATCAGGAAAGACTACCCGCTGAATTTAA
Locus: ITS2
Nucleotides: 442 bp
Sequence Upload Date: 2024-06-11

Sequence: rbcLa

Sequence ID: BRYCA2018-19.rbcLa GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
AGGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGACTAAATTATTATACTCCAGATTATGAAACCAAAGAGACTGACATTCTAGCAGCATTTCGAATGACTCCTCAACCCGGAGTACCACCTGAAGAAGCAGGAGCTGCAGTAGCTGCAGAATCTTCTACGGGTACATGGACAACTGTTTGGACTGATGGACTTACCAGTCTTGATCGTTATAAAGGCCGATGCTATGATATTGAGCCTGTTGCTGGAGAAGAAAATCAATATATTGCTTATGTTGCTTATCCATTAGATTTATTTGAAGAAGGTTCTGTTACCAACTTATTTACTTCAATTGTAGGTAACGTTTTTGGTTTTAAAGCTTTAAGAGCTTTACGTCTGGAAGATTTACGAATCCCTCCAGCTTATTCCAAAACTTTCCAAGGCCCACCTCACGGTATCCAAGTTGAAAGAGATAAATTAAACAAATATGGTCGTCCTTTATTGGGATGTACTATTAAACCAAAATTAGGTTTATCTGCTAAAAACTACGGTAGAGCAGTATACGAATGTCTT
Locus: rbcLa
Nucleotides: 553 bp
Sequence Upload Date: 2019-09-20

Sequence: trnL-F

Sequence ID: BRYCA2018-19.trnL-F GenBank Accession:
Primers Forward: ITS-BRY3d (CAACTCTCARCAACGGATA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: ITS-BRY4d (CTTAKTGATATGCTTAAAYTC) rbcLa-R (GTAAAATCAAGTCCACCRCG) trnLUAAd (GGGGATAGAGGGACTTGAAC)
Sequence Run Site: Centre for Biodiversity Genomics
CTACGGACTTAGAAAATAAATTGAGCCTTAGTAGAAAAACTTACTAAGTGTTAGCTTTCAGATTCAGGGAAACCCAGGTTGAAAAAGTATATAGGTAATCCTGAGCCAAATCTTATTCTAAAATGAGAAAGGTGCAGAGACTCGATGGAAGCTATCCTAACGAATAATTTTTTTTAGTTTATTTTTTTTTTATTTAATTTATTAATAATTAAAATCAATTAATATTTTTATTCTATCAATTAAAAATCTTTAATTAAAAAAATAGTTAAATTTTTTTTAATTAAATTATTTATGAGAATTTAAACGAGGATAAAGGTAGAGTCCAGTTTTACATGTTAGTTCTAACAACAATTAAAATTGTGGTAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGG
Locus: trnL-F
Nucleotides: 399 bp
Sequence Upload Date: 2019-09-20

Attribution

Specimen Depository: Canadian Museum of Nature, Natural Heritage Collection
Sequencing Center: Centre for Biodiversity Genomics
Photography: CBG Photography Group
Collectors: L. Cole
Specimen Identification: Jennifer Doubt

Identifiers

Process ID: BRYCA2018-19 Sample ID: CCDB-33278-B03
Record Created: 2019-02-15 Museum ID: 332012
Collection Code: CANM Field ID: M087
Deposited In: Canadian Museum of Nature, Natural Heritage Collection
Associated Datasets: DS-BITSR | Verified ITS2 reference library for the bryophytes of Canada
Specimen Linkout:
Checksum: d20f65a3643445b0493646d4aca99186

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Polytrichopsida Genus: Polytrichum
Order: Polytrichales Species: Polytrichum juniperinum
Family: Polytrichaceae Scientific Name Authorship: Hedwig, 1801
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Canada (CA) Collection Date Start: 2008-07-23
Province/State: Alberta Collection Date End:
Region/County: Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Mountain Park, Eastern edge of Rocky Mountains just W of Whitehorse Wildlands, about 55 kilometers SSE of Hinton Elevation:
Habitat: Elevation Accuracy:
Latitude: 52.9381 Depth:
Longitude: -117.205 Depth Accuracy:
Sampling Protocol:
Collectors: L. Cole
Collection Note:

Ecology

Realm: Nearctic
Biome:
Ecoregion: Northern_Rockies_conifer_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BRYCA2018-19
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABRYCA2018-19&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABRYCA2018-19&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXIKinR2NDIwtNA1tLTOyczNLElNAQDQJAt3?length=3

AJAX URLs


                

            

        

    






    


    

        

            

                
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