Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: BRYUM206-13.ITS2 GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
TGCAGAATTCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTTGACCGAGGGCATTTCTGCCAGAGCGTCACCGCGACACCCACCGAACACACCTCTAATTAAGTGGTCAAGTGTTCGAGTGAAAGTGGCCGTCCGAATGTGGCCGCCCGCCAGTGGGTACTTGTACTTCTGGGCGGCCGATTGGGTTGGCTGAAATAGAGGGGGATTTGGCCGCCGTGTAACCACAACCAGCGATCAGGTGAGCTAGGTGCAAACTCTGCAAACAAACGTGCGCTGGTTCTGTGGCAGCCAGTTGGTCGGACCCCACGAGCAGGCTCCTACCGACACTCCGGCCCAAAAAGCCGGAGTTACCGGATTTGTAGGAGGGAATATTCCGCCGTCACGCGCCAGACCTCTGATCAGAAAAGACCACCCGCTGAGTTTAAGCATATCAATAAGC
Locus: ITS2
Nucleotides: 450 bp
Sequence Upload Date: 2013-09-11

Sequence: rbcLa

Sequence ID: BRYUM206-13.rbcLa GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
GGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGATTAACTTATTACACTCCAGATTATCAAACTAAAGAAACTGATATTTTAGCAGCATTTCGAATGACTCCTCAACCAGGGGTACCACCTGAAGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCCACTGGTACATGGACTACGGTTTGGACTGATGGACTTACTAGCCTTGATCGTTATAAAGGTCGATGCTATGATATTGAAGCAGTTCCTGGAGAAGAAAATCAATATATCGCTTATGTTGCTTACCCATTAGATTTATTTGAAGAAGGTTCTGTTACTAATTTATTTACTTCTATTGTTGGTAATGTTTTTGGATTTAAAGCTTTACGAGCTTTGCGTCTAGAAGATTTGCGTATTCCTCCAGCTTATTCCAAAACTTTCCAAGGCCCACCTCACGGTATTCAAGTTGAAAGAGACAAATTAAACAAATATGGTCGTCCATTATTAGGATGTACTATTAAACCAAAATTAGGTTTATCTGCTAAAAACTACGGTAGAGCTGTTTATGAATGTCTT
Locus: rbcLa
Nucleotides: 552 bp
Sequence Upload Date: 2013-05-06

Attribution

Specimen Depository: NTNU University Museum, Department of Natural History
Sequencing Center: Centre for Biodiversity Genomics
Photography: Kristian Hassel
Collectors: Johnsen, John Inge
Specimen Identification:

Identifiers

Process ID: BRYUM206-13 Sample ID: 670270
Record Created: 2013-04-08 Museum ID: B-670270
Collection Code: TRH Field ID:
Deposited In: NTNU University Museum, Department of Natural History
Associated Datasets:
Specimen Linkout:
Checksum: 49a1387b6d683ebcffcc9eea11ca9158

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Bryopsida Genus: Syntrichia
Order: Pottiales Species: Syntrichia laevipila
Family: Pottiaceae Scientific Name Authorship: Bridel, 1819 [1818]
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: gametophyte Sex:
Brief Note: Life Stage: A
Detailed Notes:

Collection

Country/Ocean: Norway (NO) Collection Date Start: 1998-03-27
Province/State: Rogaland Collection Date End:
Region/County: Haugesund Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Byparken, vest av kirkegard Elevation:
Habitat: Elevation Accuracy:
Latitude: 59.416 Depth:
Longitude: 5.255 Depth Accuracy:
Sampling Protocol:
Collectors: Johnsen, John Inge
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion:

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BRYUM206-13
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABRYUM206-13&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABRYUM206-13&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXIKigz1NTIw0zU0ts7JzM0sSU0BAMfZC1w=?length=2

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