Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: BRYUM258-13.ITS2 GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
GGGAAGCGGCAGATTGGGTTGGCTGAAATGGAGGGAATTTGGCCGCCGTGGTAGTACAGCCCGCGATCAGGTGATCCAGGTGTTAAAAAACCTGGAACTCAAACGTGCGCTGGNTGTGGCACCCAGTTGGCCGGACTCCAAAGCAGGTCCCTACCGACACTCCGGCCGCAAAAGCcGGGCGGTGGAGGAAGGAAAATCGTCACGCATCAGACCTCTGATCAGAGAAGACTACCCGCTGAGTTTAAGCATATCAATAA
Locus: ITS2
Nucleotides: 257 bp
Sequence Upload Date: 2013-09-11

Sequence: rbcLa

Sequence ID: BRYUM258-13.rbcLa GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
GGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGATTAACTTATTACACTCCAGAGTATCAAACTAAAGACACTGATATTTTAGCAGCATTTAGAATGACTCCTCAACCAGGGGTACCAGCTGAAGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCCACTGGTACATGGACTACGGTTTGGACTGACGGACTTACTAGTCTTGATCGTTATAAAGGTCGATGCTATGATATTGAAGCAGTTGCTGGAGAAGAAAATCAATATATCGCTTATGTTGCTTACCCATTAGATTTATTTGAAGAAGGTTCTGTTACTAATTTATTTACTTCTATTGTTGGTAATGTTTTTGGATTTAAAGCTTTACGAGCTTTGCGTCTAGAAGATTTGCGTATTCCTCCAGCTTATTCCAAAACTTTCCAAGGCCCACCTCACGGTATTCAAGTTGAAAGAGACAAATTAAACAAATATGGTCGTCCATTATTAGGATGTACTATTAAACCAAAATTAGGCTTATCCGCTAAAAACTACGGTAGAGCTGTTTATGAATGTCTT
Locus: rbcLa
Nucleotides: 552 bp
Sequence Upload Date: 2013-05-06

Attribution

Specimen Depository: NTNU University Museum, Department of Natural History
Sequencing Center: Centre for Biodiversity Genomics
Photography: Kristian Hassel
Collectors: Hassel, Kristian: Hoitomt, Torbjorn
Specimen Identification:

Identifiers

Process ID: BRYUM258-13 Sample ID: 772613
Record Created: 2013-04-08 Museum ID: B-772613
Collection Code: TRH Field ID:
Deposited In: NTNU University Museum, Department of Natural History
Associated Datasets:
Specimen Linkout:
Checksum: 5d5c8e0d859f8723471f5cb711b46a9c

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Bryopsida Genus: Microbryum
Order: Pottiales Species: Microbryum rectum
Family: Pottiaceae Scientific Name Authorship: Zander, 1993
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: gametophyte Sex:
Brief Note: Life Stage: A
Detailed Notes:

Collection

Country/Ocean: Denmark (DK) Collection Date Start: 2012-09-20
Province/State: Nordjylland Collection Date End:
Region/County: Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Kongerslev Kalkbrudd Elevation: 11
Habitat: Elevation Accuracy:
Latitude: 56.884 Depth:
Longitude: 10.14 Depth Accuracy:
Sampling Protocol:
Collectors: Hassel, Kristian: Hoitomt, Torbjorn
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Baltic_mixed_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/BRYUM258-13
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABRYUM258-13&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABRYUM258-13&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXIKigz1NTK10DU0ts7JzM0sSU0BAMgyC2M=?length=2

AJAX URLs


                

            

        

    






    


    

        

            

                
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