Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | BSPSC004-13.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | Primers Reverse: | ||
| Sequence Run Site: | Smithsonian Tropical Research Institute | ||
| CTAATCTTCGGCGCATGAGCTGGTATAGTCGGAACTGCCCTTAGCCTGCTTATTCGAGCAGAACTAGGTCAACCCGGGACCCTCCTAGGAGATGATCAAATCTACAATGTTATTGTCACCGCCCACGCTTTTGTAATAATCTTTTTCATAGTGATGCCAATCATAATTGGTGGCTTCGGAAACTGACTAGTCCCACTTATAATCGGCGCCCCCGACATAGCATTCCCTCGTATAAATAATATAAGCTTCTGACTGCTACCCCCATCATTCCTCCTACTACTGGCATCATCTACAGTAGAAGCCGGAGCAGGCACAGGATGAACAGTATATCCTCCACTTGCTGGTAACCTAGCCCATGCTGGAGCTTCCGTAGACTTAGCTATCTTCTCTCTCCACTTGGCAGGTGTCTCCTCTATTCTAGGTGCTATTAACTTCATCACAACCGCCATTAACATAAAACCTCCAGCCCTCTCCCAATACCAAACACCCCTCTTCGTATGATCAGTACTTATTACCGCCGTCCTACTCTTACTCTCCCTCCCAGTTCTCGCTGCTGGTATTACCATACTACTAACAGATCGAAACCTAAACACTACATTCTTCGATCCTGCCGGAGGAGGAGATCCAGTCCTATACCAACATCTCTTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 648 bp | ||
| Sequence Upload Date: | 2014-04-09 | ||
Attribution
| Specimen Depository: | Smithsonian Tropical Research Institute |
|---|---|
| Sequencing Center: | Smithsonian Tropical Research Institute |
| Photography: | |
| Collectors: | Matthew J. Miller |
| Specimen Identification: | Matthew Miller |
Identifiers
| Process ID: | BSPSC004-13 | Sample ID: | MJM 1818 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2013-09-17 | Museum ID: | ||||
| Collection Code: | Field ID: | MJM 1818 | ||||
| Deposited In: | Smithsonian Tropical Research Institute | |||||
| Associated Datasets: |
DS-BSPUSNM | Birds of Panama Barcoding (USNM and BSPZ) DS-EBACAVES | Aves for eDNA Detection |
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| Specimen Linkout: | ||||||
| Checksum: | 453ba8e034b3c8341916abed2e40ea95 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Aves | Genus: | Calidris |
| Order: | Charadriiformes | Species: | Calidris alba |
| Family: | Scolopacidae | Scientific Name Authorship: | Pallas, 1764 |
| BIN ID: | BOLD:AAB9235 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | adult | |
| Detailed Notes: | Tissue preservation: frozen -80degC | ||
Collection
| Country/Ocean: | Panama (PA) | Collection Date Start: | |
|---|---|---|---|
| Province/State: | Colon | Collection Date End: | |
| Region/County: | Road to Portobelo | Coord. Source: | |
| Sector: | Rio Piedras | Coord. Accuracy: | |
| Exact Site: | Panama: Colon, Road to Portobelo, Rio Piedras | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 9.452 | Depth: | |
| Longitude: | -79.74 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Matthew J. Miller | ||
| Collection Note: | |||
Ecology
| Realm: | Neotropic |
|---|---|
| Biome: | |
| Ecoregion: | Isthmian-Atlantic_moist_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/BSPSC004-13 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ABSPSC004-13&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ABSPSC004-13&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXIKDgh2NjAw0TU0ts7JzM0sSU0BAMZoC0Q=?length=1