Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: EDTOL1304-23.ITS2 GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) rbcLajf634R (GAAACGGTCTCTCCAACGCAT)
Sequence Run Site: Royal Botanic Garden Edinburgh
TGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCGTCACAAATCGTCGTCCCCCTCAATTCTTTTGCGGTTATTGGACGGAAACTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATATGAGCTAAGGATGCGTGGAGCGTCCCGACATGCGGTGGTGAACTCAAGCCTCTTCATATAGTCGGTCGCTCCTATCCGTAAGCTCTCGATGACCCAATGTCCTCAAAGCGACCCCAGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGACGTCTTCGGCGTTCGA
Locus: ITS2
Nucleotides: 418 bp
Sequence Upload Date: 2023-08-28

Sequence: rbcL

Sequence ID: EDTOL1304-23.rbcL GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) rbcLajf634R (GAAACGGTCTCTCCAACGCAT)
Sequence Run Site: Royal Botanic Garden Edinburgh
GTTGGATTCAAAGCTGGTGTTAAAGAGTATAAATTGACTTATTATACTCCTGAATATGAAACCAAGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCCGGAGTTCCACCTGAAGAAGCAGGGGCTGCGGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGCCTTGATCGTTACAAAGGACGATGCTACCACATCGAGCCCGTTCCAGGAGAAGAAACTCAATTTATTGCGTATGTAGCTTACCCCTTAGACCTTTTTGAAGAAGGTTCGGTTACTAACATGTTTACCTCGATTGTGGGTAATGTATTTGGGTTCAAAGCCCTGGCTGCTCTACGTCTAGAGGATCTGCGAATCCCTCCTGCTTATACTAAAACTTTCCAGGGACCACCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGACGTCCTCTATTAGGATGTACTATTAAACCAAAATTGGGGTTATCCGCGAAGAACTATGGTAGAGCAGTTTATGAATGTCTACGTGGTGGACTTGATTTTACCAAAGATGATGAGAATGTGAACTCCCAACCATTT
Locus: rbcL
Nucleotides: 603 bp
Sequence Upload Date: 2023-09-16

Attribution

Specimen Depository: Royal Botanic Garden Edinburgh
Sequencing Center: Royal Botanic Garden Edinburgh
Photography:
Collectors: MARKUS RUHSAM
Specimen Identification: Markus Ruhsam

Identifiers

Process ID: EDTOL1304-23 Sample ID: EDNA23-0064528
Record Created: 2023-06-13 Museum ID:
Collection Code: Field ID: DMR302
Deposited In: Royal Botanic Garden Edinburgh
Associated Datasets: DS-DTOLRBGE | DToL barcode samples from the RBGE Genome Acquisition Lab
DS-SEEDPLNT | Darwin Tree of Life: Seed Plants
DS-UKBOL | UK Barcode of Life
Specimen Linkout:
Checksum: 25cc84664ba41a914ea612ffae8097b5

Taxonomy

Kingdom: Plantae Subfamily: Brassicoideae
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Lepidium
Order: Brassicales Species: Lepidium campestre
Family: Brassicaceae Scientific Name Authorship: (L.) W.T. Aiton
BIN ID: Subspecies:
Identification Method: Morphology
Taxonomy Notes: could be L. heterophyllum
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Vouchered:Registered Collection Reproduction:
Tissue Descriptor: silica gel dried Sex:
Brief Note: Life Stage:
Detailed Notes: EDTOL05515

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2023-05-17
Province/State: Scotland Collection Date End:
Region/County: Midlothian Coord. Source:
Sector: Edinburgh Coord. Accuracy:
Exact Site: Hermitage Elevation:
Habitat: next to path Elevation Accuracy:
Latitude: 55.919 Depth:
Longitude: -3.183 Depth Accuracy:
Sampling Protocol:
Collectors: MARKUS RUHSAM
Collection Note:

Ecology

Realm: Palearctic
Biome: Temperate_Broadleaf_&_Mixed_Forest_simplify-0.001_buffered-0.018
Ecoregion: Celtic_broadleaf_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/EDTOL1304-23
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AEDTOL1304-23&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AEDTOL1304-23&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJ1CfH3MTQ2MNE1MrbOyczNLElNAQDQKgt2?length=2

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