Collection Site(s)
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Sequence: ITS2
| Sequence ID: | EDTOL1799-24.ITS2 | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | Primers Reverse: | ||
| Sequence Run Site: | Royal Botanic Garden Edinburgh | ||
| ATATCTTGGCTCTTGCAACGATGAAGAACGCAGCGAAATGCGATACCTAGTGTGAATTGCAGAATTCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTTGTCCCGAGGGCATGCCTGCCTGAGCGTCACCGCACTCCCACCTGGA-AATCTCTCCAGAGTGGAACTGGC-CGTCCGGGACCCGGC-GT--GA-A---GC------T---ATGGGTGCCGGTCGGCTGAAATGTAGCGATCTGGACGTAGCCCGAGAGGGAGGCCGCGAGAAGGTGATCTGCCCTTTGCCGGGCAGAGTCTTATTGGACAGCGCCTCCCCTCTTGGGTGGTCTGATCGA-CGAGCAAGAGGGGGAGCCTTTGGTTCCCTCCCTTGCATCACTGGGGAGAGTGCAAGTAACTCTGCACTCCCCCCTCCCCATGGCTTGGACCTCAGATCAGGCAAGATTACCCGCTGAGTTTAA | |||
| Locus: | ITS2 | ||
| Nucleotides: | 473 bp | ||
| Sequence Upload Date: | 2024-06-17 | ||
Sequence: rbcL
| Sequence ID: | EDTOL1799-24.rbcL | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | Primers Reverse: | ||
| Sequence Run Site: | Royal Botanic Garden Edinburgh | ||
| AGGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAGATTAAATTATTATACGCCTGATTATGAGACAAAAGCGACAGATATTTTAGCAGCATTTCGTATGACTCCTCAACCGGGAGTACCACCCGAAGAAGCAGGGGCAGCAGTAGCTGCTGAATCTTCAACCGGTACATGGACTACGGTTTGGACTGATGGGCTTACAAGTCTTGACCGTTACAAAGGTCGATGCTATGACATTGAACCCGTTGCTGGTGAAGAAAATCAATATATTGCTTATGTAGCTTATCCGTTAGATTTATTCGAAGAAGGTTCTGTTACAAATCTTTTCACTTCCATCGTAGGTAATGTATTCGGATTCAAAGCTTTACGAGCTTTACGTCTTGAAGATTTACGTATTCCTCCAGCTTATGTAAAAACTTTCCAAGGTCCACCTCATGGTATCCAAGTTGAAAGAGATAAATTAAATAAATACGGTCGTCCTTTATTGGGCTGTACTATCAAACCAAAATTAGGTTTATCTGCTAAAAATTATGGTAGAGCTGTATATGAATGTCTTCGTGGTGGGCTTGACTTTACAAAAGATGATGAGAATGTAAACTCCCAACCATTT | |||
| Locus: | rbcL | ||
| Nucleotides: | 607 bp | ||
| Sequence Upload Date: | 2024-06-17 | ||
Sequence: trnH-psbA
| Sequence ID: | EDTOL1799-24.trnH-psbA | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | Primers Reverse: | ||
| Sequence Run Site: | Royal Botanic Garden Edinburgh | ||
| TTTAGGTATTTCCGGTACTTTCAATTTCATGATTGTATTCCAAGCTGAACATAACATCCTTATGCACCCGTTCCACATGTTGGGTGTAGCTGGTGTATTCGGCGGCTCTCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTAATCAGAGAAACTACTGAAAATGAATCTGCTAACGCAGGTTATAAATTCGGTCAAGAAGAAGAAACTTACAATATTGTAGCGGCTCACGGTTATTTTGGTAGATTAATTTTCCAATATGCAAGCTTCAACAATTCTCGTTCATTACATTTCTTCTTAGCTGCTTGGCCTGTTGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCGTTTAACTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTTATTAATACTTGGGCTGATATTATCAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATTTAGCTGCTATTGAAGCTCCTATTACTAACGGTTAATA-CTTAAA-AC--TAGATTCTAACCTTTCAAGA-ACTATA-AATTTAT-GAAGGGGCAGA----AAAACTAAAAAAAAATAATGATCCTTA-AGAGTCAAAGC-TTGAGGA--T--C-A--T-TATTTAGAC--TTTAT-TT--AT-AT--A-----GTA--TAGTAAAATGAAATAAGG--GCGGA-CGTAGCCAAGTGGATTAAGGCAGTGGATT-GTG-GATCCTCCATTCGCGG | |||
| Locus: | trnH-psbA | ||
| Nucleotides: | 783 bp | ||
| Sequence Upload Date: | 2024-06-17 | ||
Sequence: trnL-F
| Sequence ID: | EDTOL1799-24.trnL-F | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | Primers Reverse: | ||
| Sequence Run Site: | Royal Botanic Garden Edinburgh | ||
| GACTTAATTTAATTGAGCCTTAGTAAAGAAATTAACTAAGTGATTGTTTCCATATTCAGGGAAATCTAGGTTGATAAA-A-ACATAA-T-AGATAATCCTGAGCCAA-ATTTTGTTTCGCAAACAAAATAGGTGCAGAGACTCAAAGGGAAC-T-G-TC-----T-AA-AAA-AT--TTTGTCA-TTTGTACCCTTGGTTCGTTCT-A-T-A--ACGT--GT-CA---A-T--A-GGATA--ATCGAAGATCATTAATA---A-A-G-TTATTTCTGAGTTATT-AT--AAATAATAAT-ATTAAATAAAGATAAAGATAGAGTCCATTTTTACAGGCTA-AGTTTAACATAGCAAAGATGTAAATCATTGTAAAAAGAAAATCCGTTGGCTTTTTAGACCGTGAGGGTTCAAGTCCCTCTACCCCCAGAATAAAT-AAATAT-TTTATAATATTGACATAATTTTTATTTCCATGTTAGAATT--AG-----CA-AAAATTGCCGGAATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC | |||
| Locus: | trnL-F | ||
| Nucleotides: | 542 bp | ||
| Sequence Upload Date: | 2024-06-17 | ||
Attribution
| Specimen Depository: | Royal Botanic Garden Edinburgh |
|---|---|
| Sequencing Center: | Royal Botanic Garden Edinburgh |
| Photography: | David Bell |
| Collectors: | DAVID BELL |
| Specimen Identification: | David Bell |
Identifiers
| Process ID: | EDTOL1799-24 | Sample ID: | EDNA24-0065626 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2024-03-24 | Museum ID: | ||||
| Collection Code: | Field ID: | DBELL1902 | ||||
| Deposited In: | Royal Botanic Garden Edinburgh | |||||
| Associated Datasets: |
DS-DTOLRBGE | DToL barcode samples from the RBGE Genome Acquisition Lab DS-LIVERWRT | Darwin Tree of Life: Liverworts |
|||||
| Specimen Linkout: | ||||||
| Checksum: | 25abe85a5d5dfac2cef731d2de0680df | |||||
Taxonomy
Specimen
| Voucher Status: | Vouchered:Registered Collection | Reproduction: | |
|---|---|---|---|
| Tissue Descriptor: | silica gel dried | Sex: | |
| Brief Note: | Life Stage: | ||
| Detailed Notes: | EDTOL06668,EDTOL06669,EDTOL06670,EDTOL06671,EDTOL06672,EDTOL06673,EDTOL06674,EDTOL06675,EDTOL06676,EDTOL06677,EDTOL06678,EDTOL06679,EDTOL06680,EDTOL06681,EDTOL06682,EDTOL06683 | ||
Collection
| Country/Ocean: | United Kingdom (GB) | Collection Date Start: | 2024-01-03 |
|---|---|---|---|
| Province/State: | Northern Ireland | Collection Date End: | |
| Region/County: | vice county H39 ANTRIM | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Cairn Road, N of Carrickfergus, J 3952 9270 | Elevation: | 243 |
| Habitat: | Rural garden; on mossy stone wall | Elevation Accuracy: | |
| Latitude: | 54.7628 | Depth: | |
| Longitude: | -5.83306 | Depth Accuracy: | |
| Sampling Protocol: | Darwin Tree of Life (DToL) bryophyte collection SOP | ||
| Collectors: | DAVID BELL | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | Temperate_Broadleaf_&_Mixed_Forest_simplify-0.001_buffered-0.018 |
| Ecoregion: | Celtic_broadleaf_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/EDTOL1799-24 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AEDTOL1799-24&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AEDTOL1799-24&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJ1CfH3MTS3tNQ1MrHOyczNLElNAQDRHAuJ?length=4