Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: EDTOL1801-24.ITS2 GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Royal Botanic Garden Edinburgh
ATATCTTGGCTCTTGCAACGATGAAGAACGCAGCGAAATGCGATACGTAGTGTGAATTGCAGAATTCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTTGACCGAGGGCATTTCTGCCAGAGCGTCACCGCGACACCCACCAAACACACCTATATCCTAGTGCTGTGTTCGAGTGAAAGTGGCCATCCGAATGGGGCCCCGCCCTTCGTTGGGCGCGGGCACAGATTGGGTTGGCTGAAATGTAGGGAATTTGGCCGCCGTGGTAGAACAACCAGCGATCAGGTGATCCGGGTGCAAACCCGGAACTCAAACGTGCGCCGGTTGCGACACCCAGTTTGGTTCCAAGCTCCAAAGCAGGTCTCCCCTCCCCTTCGCTCCACCGAGTGAAGGGGAAAGGGGAAAAACGTCACGCATCAGACCTCTGATCAGAAAAGACTACCCGCTGAGTTTAA
Locus: ITS2
Nucleotides: 463 bp
Sequence Upload Date: 2024-06-20

Sequence: rbcL

Sequence ID: EDTOL1801-24.rbcL GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Royal Botanic Garden Edinburgh
AGGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGATTAACTTATTACACTCCAGATTATCAAACTAAAGAAACTGATATTTTAGCAGCATTTCGAATGACTCCTCAACCAGGGGTACCACCTGAAGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCTACTGGTACATGGACTACGGTTTGGACTGATGGACTTACTAGTCTTGATCGTTATAAAGGTCGATGCTATGATATTGAAGCAGTTCCTGGAGAAGAAAATCAATATATCGCTTATGTTGCTTACCCATTAGATTTATTTGAAGAAGGTTCTGTTACTAATTTATTTACTTCTATTGTTGGTAATGTTTTTGGATTTAAAGCTTTACGGGCTTTGCGTCTAGAAGATTTGCGTATTCCTCCAGCTTATTCCAAAACTTTCCAAGGCCCACCTCACGGTATTCAAGTTGAAAGAGACAAATTAAACAAATATGGTCGTCCATTATTAGGATGTACTATTAAACCAAAACTAGGTTTATCTGCTAAAAACTACGGTAGAGCTGTTTATGAATGTCTTCGTGGTGGACTTGATTTCACAAAAGATGATGAAAACGTAAATTCTCAGCCATTC
Locus: rbcL
Nucleotides: 607 bp
Sequence Upload Date: 2024-06-18

Sequence: trnH-psbA

Sequence ID: EDTOL1801-24.trnH-psbA GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Royal Botanic Garden Edinburgh
TTTAGGAATCTCTGGTACTTTTAACTTTATGATTGTGTTCCAAGCTGAACATAACATTCTTATGCACCCATTCCACATGCTTGGTGTAGCTGGTGTATTCGGCGGCTCTCTATTCAGTGCTATGCATGGTTCCTTGGTAACGTCAAGTTTAATCCGAGAAACTACTGAGAACGAATCTGCTAACGCAGGTTACAAGTTTGGTCAAGAAGAAGAAACTTACAACATCGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAATACGCTAGCTTTAACAACTCTCGTTCTTTACACTTCTTTTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACTGCATTAGGTATTAGCACAATGGCTTTCAACCTAAATGGTTTTAACTTTAACCAATCTGTTGTTGATAGCCAAGGTCGTGTAATTAACACTTGGGCTGATATTATCAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAACGCTCACAACTTCCCTCTAGATTTAGCTTCTGTTGAAGCTCCTTCTGTAAACGGTTAATATTTTAATTATATTTTTAT-AAAATAAATTTATTTAAAATAGGATAACAACTT-GAAAACAATGACCTTAGG-ATTAAGAGTTCTAAGGTCATTGTTTTT-TTTTAATAAAAA-G--TTTGT-AAAAAAGGCGGACGTGGCCAAGTGGATTAAGGCAGTGGATTGTGGATCCACCATGCGCGG
Locus: trnH-psbA
Nucleotides: 728 bp
Sequence Upload Date: 2024-06-20

Sequence: trnL-F

Sequence ID: EDTOL1801-24.trnL-F GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Royal Botanic Garden Edinburgh
GACTTAAATAATTTGAGCTTTAGTAGAAAAACTTATTAAATGCTAGCTTTCAGATTCAGGGAATCTTAGGTTGAAAAAAAGATAAGTAATCCTGAGCCAAATTTTATATTTAAAAAACAAAATAGGTGCAGAGACTCGATGGAAGCTATCCTAACGCGTGTAAATTAAATCAAAAAAATTCATTAAAATTTTTTGATTTAATTTACACGTGAGGATAAAGATAGAGTCCAATTTTACATGTTAATTTTAACAACAATTTAAATTGTAGTAAAAAGAAAATCCGTTGGCTTTATTGACCGTGAGGGTTCAAGTCCCTCTACCCCCAAAATACTTAATTCAAAAATTTTTATTGACATAAGTTTACAGTTTATGTTAGGATAGCCTAAATAAAAAAGCCGGAGTAGCTCAGTTGGTAGAGCAGAGGACTGAAAATC
Locus: trnL-F
Nucleotides: 434 bp
Sequence Upload Date: 2024-06-25

Attribution

Specimen Depository: Royal Botanic Garden Edinburgh
Sequencing Center: Royal Botanic Garden Edinburgh
Photography: David Bell
Collectors: DAVID BELL
Specimen Identification: David Bell

Identifiers

Process ID: EDTOL1801-24 Sample ID: EDNA24-0065628
Record Created: 2024-03-24 Museum ID:
Collection Code: Field ID: DBELL1904
Deposited In: Royal Botanic Garden Edinburgh
Associated Datasets: DS-DTOLRBGE | DToL barcode samples from the RBGE Genome Acquisition Lab
DS-MOSS | Darwin Tree of Life: Moss
Specimen Linkout:
Checksum: 819e383220e51fe148b056dd0570e3d7

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Bryopsida Genus: Tortula
Order: Pottiales Species: Tortula truncata
Family: Pottiaceae Scientific Name Authorship:
BIN ID: Subspecies:
Identification Method: Morphology
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Vouchered:Registered Collection Reproduction:
Tissue Descriptor: silica gel dried Sex:
Brief Note: Life Stage:
Detailed Notes: EDTOL06700,EDTOL06701,EDTOL06702,EDTOL06703,EDTOL06704,EDTOL06705,EDTOL06706,EDTOL06707,EDTOL06708,EDTOL06709,EDTOL06710,EDTOL06711,EDTOL06712,EDTOL06713,EDTOL06714,EDTOL06715

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2024-01-03
Province/State: Northern Ireland Collection Date End:
Region/County: vice county H39 ANTRIM Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Cairn Road, N of Carrickfergus, J 3952 9270 Elevation: 244
Habitat: Rural garden; on bare soil in flower bed Elevation Accuracy:
Latitude: 54.7631 Depth:
Longitude: -5.83333 Depth Accuracy:
Sampling Protocol: Darwin Tree of Life (DToL) bryophyte collection SOP
Collectors: DAVID BELL
Collection Note:

Ecology

Realm: Palearctic
Biome: Temperate_Broadleaf_&_Mixed_Forest_simplify-0.001_buffered-0.018
Ecoregion: Celtic_broadleaf_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/EDTOL1801-24
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AEDTOL1801-24&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AEDTOL1801-24&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJ1CfH3MbQwMNQ1MrHOyczNLElNAQDQVQt5?length=4

AJAX URLs


                

            

        

    






    


    

        

            

                
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