Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: EDTOL662-21.ITS2 GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) rbcLajf634R (GAAACGGTCTCTCCAACGCAT)
Sequence Run Site: Royal Botanic Garden Edinburgh
TGCAGAATCCCGCGAACCATCAAGTCTTTGAACGCAAGTTGCGCCCGGAGCCTTTGGGCTGAGGGCTTGCCTGCTTGGGTGTCATGTCGTTCGACGCTGCAGCCACCACCCCGCCCGCACTTGACGTGCGTGGCGTGGGCCTGAGGTGGGCACGCGGATTTTGGCCTTCCGTTTGTTTCAGGCGGTGGGCTCAAGTTAGTTGCGGGGATGAGTGCGGAAGCATGACCAGAGGTGATCTGCTTTGGGCAGTCACATTTTGCGTCGTGCGGCCCCTTCTATCTAGTAGGCAACCTAGCAACCCAGCGACGGTCGATAGCCTCGACCATCATGATCGAGACCCCAAGTCAGGTGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAGAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGACAAGTCCAGTTTGAAAATCGGAGGGCCTTGCGCTCCGA
Locus: ITS2
Nucleotides: 475 bp
Sequence Upload Date: 2021-10-23

Sequence: rbcL

Sequence ID: EDTOL662-21.rbcL GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) rbcLajf634R (GAAACGGTCTCTCCAACGCAT)
Sequence Run Site: Royal Botanic Garden Edinburgh
GGTGTTAAAGATTACAAATTGACTTATTATACTCCTGACTATGAAACCAAGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCCGGAGTTCCACCGGAAGAAGCAGGGGCTGCAGTGGCTGCCGAATCTTCTACTGGTACATGGACAACCGTGTGGACTGATGGACTTACTAGCTTGGATCGTTACAAAGGACGATGCTATCACATCGAGCCCGTTGTTGGGGAGGAAGATCAATTTATTGCTTATGTAGCTTATCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACCAACATGTTTACTTCCATTGTGGGTAATGTATTTGGGTTCAAAGCTCTACGAGCTCTACGTCTGGAAGATCTGCGAATTCCTCCTGCTTATATCAAAACTTTCCAAGGTCCACCCCATGGAATCCAGGTTGAGAGAGATAAATTAAACAAATATGGTCGTCCCCTATTGGGATGTACTATTAAACCTAAATTGGGATTATCCGCGAAAAACTACGGTAGAGCAGTTTATGAATGTCTACGTGGTGGACTTGATTTTACCAAAGATGATGAGAACGTGAACTCACAACCATTT
Locus: rbcL
Nucleotides: 588 bp
Sequence Upload Date: 2021-10-21

Attribution

Specimen Depository: Royal Botanic Garden Edinburgh
Sequencing Center: Royal Botanic Garden Edinburgh
Photography: Markus Ruhsam
Collectors: Markus Ruhsam
Specimen Identification: Markus Ruhsam

Identifiers

Process ID: EDTOL662-21 Sample ID: EDNA21-0061462
Record Created: 2021-09-29 Museum ID:
Collection Code: Field ID: DMR128
Deposited In: Royal Botanic Garden Edinburgh
Associated Datasets: DS-DTOLRBGE | DToL barcode samples from the RBGE Genome Acquisition Lab
DS-SEEDPLNT | Darwin Tree of Life: Seed Plants
DS-UKBOL | UK Barcode of Life
Specimen Linkout:
Checksum: 959d598292f2b5898620bf86a1525192

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Tracheophyta Tribe:
Class: Liliopsida Genus: Triglochin
Order: Alismatales Species: Triglochin maritima
Family: Juncaginaceae Scientific Name Authorship: L.
BIN ID: Subspecies:
Identification Method: Morphology
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Vouchered:Registered Collection Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes: EDTOL02292,EDTOL02293,EDTOL02294

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2021-08-19
Province/State: Scotland Collection Date End:
Region/County: East Lothian Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Aberlady Elevation:
Habitat: on grassy part of estuary Elevation Accuracy:
Latitude: 56.014 Depth:
Longitude: -2.85 Depth Accuracy:
Sampling Protocol:
Collectors: Markus Ruhsam
Collection Note:

Ecology

Realm: Palearctic
Biome: Temperate_Broadleaf_&_Mixed_Forest_simplify-0.001_buffered-0.018
Ecoregion: Celtic_broadleaf_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/EDTOL662-21
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AEDTOL662-21&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AEDTOL662-21&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJ1CfH3MTMz0jUytM7JzM0sSU0BAMagC0o=?length=2

AJAX URLs


                

            

        

    






    


    

        

            

                
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