Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | FBOST018-12.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | ZplankF1_t1 (TGTAAAACGACGGCCAGTTCTASWAATCATAARGATATTGG) | Primers Reverse: | ZplankR1_t1 (CAGGAAACAGCTATGACTTCAGGRTGRCCRAARAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| AACTTTGTATTTAATTTTTGGTGCTTGATCCGCAATACTAGGAACTGCTTTAAGAGTCATTATTCGGGCAGAACTAGGCCAGCCTGGGTCTTTGATTGGTAATGACCAAATCTACAACACAATTGTTACAGCCCACGCTTTTGTCATAATTTTTTTTATAGTGATACCTATCATAATCGGAGGATTTGGAAATTGATTAGTTCCTTTAATACTGGGGGCCCCTGACATAGCATTCCCCCGAATAAATAACATGAGATTCTGGCTCCTCCCTCCCTCTCTTTCCTTGCTGAGAATTGGGATACTAACAGAAAGAGGGGCAGGAACAGGCTGAACAGTATACCCCCCTTTATCCAGAAACATTTCTCATTCAGGAGCAAGAGTAGATTTAACCATTTTTTCGCTCCATTTAGCTGGGGCCTCTTCTATTTTAGGGGCTATTAACTTTATCACAACAATTGCTAATATACGAGCAGCAAGAATATCCTTAGACCGAATCCCCCTTTTTGTTTGATCTGTGGGGATCACAGCACTTTTGCTTCTATTATCCCTCCCTGTCCTAGCGGGAGCAATCACTATACTTTTAACAGACCGTAACTTGAACACAACTTTTTTTGACCCTGCGGGCGGAGGAGACCCTATTTTATACCAGCATCTATTT | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2012-09-07 | ||
Attribution
| Specimen Depository: | Bavarian State Collection of Zoology |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | BFB handling team |
| Collectors: | Dr. Renate Matzke-Karasz |
| Specimen Identification: | Renate Matzke-Karasz |
Identifiers
| Process ID: | FBOST018-12 | Sample ID: | BC ZSM BavOst-18 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2012-07-05 | Museum ID: | ||||
| Collection Code: | SNSB-ZSM | Field ID: | 18-11-6-21 | |||
| Deposited In: | Bavarian State Collection of Zoology | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | 185166897a7582f2a32876150a54ded8 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Ostracoda | Genus: | Cyclocypris |
| Order: | Podocopida | Species: | Cyclocypris ovum |
| Family: | Candonidae | Scientific Name Authorship: | Jurine, 1820 |
| BIN ID: | BOLD:ABZ8487 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | A | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Germany (DE) | Collection Date Start: | 2011-06-21 |
|---|---|---|---|
| Province/State: | Bavaria | Collection Date End: | |
| Region/County: | Pond near Eibsee | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Elevation: | 978 | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 47.45437 | Depth: | |
| Longitude: | 10.98409 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Dr. Renate Matzke-Karasz | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Alps_conifer_and_mixed_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/FBOST018-12 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AFBOST018-12&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AFBOST018-12&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJz8g8OMTC00DU0ss7JzM0sSU0BAMakC0s=?length=1