Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: FBPL3138-14.ITS2 GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK_xF (TAATTTACGATCAATTCATTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) matK-MALPR1 (ACAAGAAAGTCGAAGTAT) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
TGCAGAATTCCGCGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTTGACCGAGGGCATTTCTGCCAGAGCGTCACCGCGACACCCACCAAAACACACTTGAGAGTGCGTTTTGAGTGAAAGTGGCCATCCGAATGGGGCCGCCGGCGCCCGGGAGTTCTCCTCCTTGGGCGGCGGCAGCAGATTGGGTTGGCTGAAATGGAGGGAATCCTTCGGCCGCCGTGGCGACACGGCCCGCGATCAGGTGGTCCAGTTGCAAAGCTGGAACTCAAACGTGCGTCGGTCGTGGCGCCCAGTCGGCCGGATTCACAAGCAGGTCCCTACCGACACCCCGCCCCAGAAAGGCGGGGTGACGGGAGGCTTACGTCACGCATCAGACCTCTGATCAGAAAAGACTACCCGCTGAGTTTAA
Locus: ITS2
Nucleotides: 417 bp
Sequence Upload Date: 2015-04-09

Sequence: rbcLa

Sequence ID: FBPL3138-14.rbcLa GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK_xF (TAATTTACGATCAATTCATTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) matK-MALPR1 (ACAAGAAAGTCGAAGTAT) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
GGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGACTAACTTATTACACTCCAGATTATCAAACTAAAGATACTGATATTTTAGCAGCATTTCGAATGACTCCTCAACCAGGGGTACCACCTGAAGAAGCAGGAGCTGCAGTAGCTGCGGAATCTTCTACTGGTACATGGACTACGGTTTGGACTGATGGACTTACTAGTCTTGATCGTTATAAAGGTCGATGCTATGATATCGAAGCAGTTCCTGGAGAAGAAAATCAATATATCGCTTATGTTGCTTACCCATTAGATTTATTTGAAGAAGGTTCTGTTACTAATTTATTTACTTCTATTGTTGGTAATGTTTTTGGATTTAAAGCTTTACGAGCTTTGCGTCTAGAAGATTTGCGTATTCCTCCAGCTTATTCCAAAACTTTCCAAGGCCCACCTCACGGTATTCAAGTTGAAAGAGACAAATTAAACAAATATGGTCGTCCATTATTAGGATGTACTATTAAACCAAAATTAGGTTTATCTGCTAAAAACTACGGTAGAGCTGTTTATGAATGTCTT
Locus: rbcLa
Nucleotides: 552 bp
Sequence Upload Date: 2015-05-15

Attribution

Specimen Depository: Finnish Museum of Natural History, Botanical Museum
Sequencing Center: Centre for Biodiversity Genomics
Photography:
Collectors: Juha Pykaelae
Specimen Identification:

Identifiers

Process ID: FBPL3138-14 Sample ID: H4237818
Record Created: 2014-09-05 Museum ID: H4237818
Collection Code: H Field ID:
Deposited In: Finnish Museum of Natural History, Botanical Museum
Associated Datasets:
Specimen Linkout:
Checksum: 214b1eac4fd67044e020f01cd5f0c637

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Bryopsida Genus: Aloina
Order: Pottiales Species: Aloina rigida
Family: Pottiaceae Scientific Name Authorship:
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Finland (FI) Collection Date Start: 2003-10-11
Province/State: Collection Date End:
Region/County: Regio aboensis Coord. Source:
Sector: Lohja Coord. Accuracy:
Exact Site: Ojamo Elevation: 35
Habitat: Elevation Accuracy:
Latitude: 60.241 Depth:
Longitude: 24.033 Depth Accuracy:
Sampling Protocol:
Collectors: Juha Pykaelae
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Scandinavian_and_Russian_taiga

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/FBPL3138-14
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AFBPL3138-14&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AFBPL3138-14&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXJzCvAxNjS20DU0sc7JzM0sSU0BAMSQCyk=?length=2

AJAX URLs


                

            

        

    






    


    

        

            

                
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