Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | FPMAR177-08.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LCO1490 (GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | HCO2198 (TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| TACTTTGTATTTTATATTTGGAGCCTGAGCTGGTATAGTTGGGACTTCTTTAAGTTTAATTATTCGAGCCGAATTAAGTCAGCCTGGGAGGCTAATCGGCAACGACCAAATCTACAATGTAGTTGTAACTGCCCACGCCTTCGTTATAATTTTCTTTATAGTTATACCTATTATAATTGGGGGATTCGGAAATTGACTAGTTCCCCTTATATTAGGAGCTCCTGATATAGCCTTTCCCCGTATAAATAACATAAGATTTTGACTTCTCCCTCCCTCCCTATCTTTATTACTCACAAGAAGTATAGTTGAAAGCGGGGTCGGCACCGGATGAACAGTTTATCCCCCCTTAGCAGCCGCTATCGCCCACGCGGGGGCCTCTGTAGATTTGGGAATCTTTTCTTTACACCTTGCCGGGGTTTCCTCTATTTTAGGCGCAGTTAATTTCATAACTACTGTTATCAATATACGCTCCTATGGTATAACAATGGATCAAATACCTCTCTTTGTCTGGGCCGTTTTCATTACGGCAATCCTCCTTCTCTTGTCCCTTCCCGTCCTAGCGGGGGCTATTACTATGCTTCTTACAGATCGTAATCTTAACACCTCTTTCTTTGACCCTGCCGGAGGGGGTGACCCCGTTCTCTACCAACACTTGTTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2008-03-25 | ||
Attribution
| Specimen Depository: | Florida Museum of Natural History |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Gustav Paulay |
| Collectors: | J. Deck, J. Gross, W. Lee, A. Ormos, G. Paulay, K. Rachwal, D. Steinke |
| Specimen Identification: | Gustav Paulay |
Identifiers
| Process ID: | FPMAR177-08 | Sample ID: | BFLA-254 | |||
|---|---|---|---|---|---|---|
| Record Created: | Museum ID: | UF13281 | ||||
| Collection Code: | Field ID: | BFLA-254 | ||||
| Deposited In: | Florida Museum of Natural History | |||||
| Associated Datasets: |
DS-CCDBPUB0 | Public release of pre-2010 data produced by the CCDB DS-NISEURE | Assemble and audit of a DNA barcode reference library for marine invertebrate NIS occurring in European Coastal Regions - Grade E DS-NISEUREF | Curated DNA barcode reference library for marine invertebrate NIS occurring in European Coastal Regions |
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| Specimen Linkout: | ||||||
| Checksum: | 9b8052c07e16fb4c60f17750617d76c4 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Malacostraca | Genus: | Pachygrapsus |
| Order: | Decapoda | Species: | Pachygrapsus transversus |
| Family: | Grapsidae | Scientific Name Authorship: | Gibbes, 1850 |
| BIN ID: | BOLD:AAG9839 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | FTP-11 | ||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2008-03-05 |
|---|---|---|---|
| Province/State: | Florida | Collection Date End: | |
| Region/County: | Fort Pierce | Coord. Source: | |
| Sector: | Fort Pierce, offshore | Coord. Accuracy: | |
| Exact Site: | shallow shelf off Fort Pierce | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 27.467 | Depth: | |
| Longitude: | -80.2 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | J. Deck, J. Gross, W. Lee, A. Ormos, G. Paulay, K. Rachwal, D. Steinke | ||
| Collection Note: | |||
Ecology
| Realm: | |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/FPMAR177-08 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AFPMAR177-08&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AFPMAR177-08&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXIL8HUMMjQ31zWwsM7JzM0sSU0BAMa8C04=?length=1