Collection Site(s)



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Sequence: ITS2

Sequence ID: FPUK157-14.ITS2 GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK2.1a (ATCCATCTGGAAATCTTAGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
TGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCTGAGGCCA---GCTGGCCAAGGGCACGTC-CGCCT---GGGCGTCAAG---CATT-GAATCGCTCCACAATACCAATGATG---TTATGCA-----------TTGGTCTTGTCC----------AGGATGCGGAGAATGGCCCG--TCATGCG--CTTA-------------------TGTGTGGCAGGCTGAAGAGC---GGGGATGATTTTCTTTT-GCAAC--GATCGATTAA--TAGGTGGG-----ATGAAATTC-TTT-TTGATCCTAA--------TCATCGTC--AGGTTGCTTTAAGAAAG-----------TTGTGCATATCTCATTTTA--ACCCAACTCAATCGTT---------------ATTGGATGA------AAATTGACATGCGA-CCCCAGGATGGGCGGGGTG-ACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAGAA-GAAACTTACGAGGATTCCCCTAGTAACGGCGAGCGAACC-GGGAATT--GCCCAGCAT-GGGAATCGGGTTGCTAT---GCGACTCGA
Locus: ITS2
Nucleotides: 595 bp
Sequence Upload Date: 2020-05-13

Sequence: matK

Sequence ID: FPUK157-14.matK GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK2.1a (ATCCATCTGGAAATCTTAGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
TTTCCACGAATATCATAATTTAAATAGTGTCATTACTTCAAAGAAAGACATTTACGTCTTTTCAAAAATAAATCAAAGATTTTTTTGGTTTTTACATAATTCTTATGTATATGAATGCGAATATATATTCCTGTTTCTTCGTAAACAGTCTTCTTATTTACGATCAACATCGTTTGAAGTATTTCTTGAACGAACACATTTCTATGGAAAAATAGAATATTTTAGAGTAATGTATTGTAATTCTTTTCAGAGGATTCTATGGTTCTTCAAAGAACCTTTCATACATTATGTTCGATATCAAGGAAAAGCAATTTTGGCTTCAAAGGGAACTCTAATTCTGATGAATAAATGGAAATTTCATCTTGTTCATTTTTGGCAATTTTATTTTCATTTTTGGTCTCAACCTTATAGGATCCATATAAAGGAATTACCCAACTATTCCTTATCTTTTCTGGGGTATTTTTTAAGTGTACTAAAAAAGACTTTGGTAATAAGAAATCAAATGCTGGAGAATTCATTTTTAATAAATACTCTGACTAAGAAATTAGATACCATAGCCCCAGTTATTTCTCTTATTGGAGCATTGTCAAAAGCTCAATTTTGTACTGTATTGGGCCATCCCATTAGTAAACCAATCTGGACCGATTTATCGGATTCTGATATTCTTTATCGATTTTGTCGGATATGTAGAAATATTTGTCGTTATCACAGTGGATCCTCAAAAAAACAGATTTTGTATCGTATAAAGTAT
Locus: matK
Nucleotides: 751 bp
Sequence Upload Date: 2014-05-26

Sequence: rbcL

Sequence ID: FPUK157-14.rbcL GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK2.1a (ATCCATCTGGAAATCTTAGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
AAGCGTTGGATTTAAAGCTGGTGTTAAAGATTACAAATTGACTTATTATACTCCTGACTACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCGCCTGAAGAAGCAGGCGCTGCGGTAGCAGCCGAATCTTCTACTGGTACATGGACAACTGTGTGGACTGATGGACTTACCAGTCTCGATCGTTACAAAGGACGATGCTACCACATCAAAGCCGTTGTTGGGGAGGAAAATCAATATATTGCTTATGTAGCTTATCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTTTTTGGTTTCAAAGCTCTGCGAGCTCTACGTCTGGAAGATCTGCGAATTCCCCCTGCTTATTCCAAAACTTTCCAAGGTCCACCTCATGGCATCCAAGTTGAAAGAGATAAATTGAACAAGTACGGTCGTCCCCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCAAAAAACTACGGTAGAGCGGTTT
Locus: rbcL
Nucleotides: 542 bp
Sequence Upload Date: 2014-05-26

Attribution

Specimen Depository: Royal Botanic Garden Edinburgh
Sequencing Center: National Botanic Garden of Wales
Photography:
Collectors: Ian Hedge
Specimen Identification:

Identifiers

Process ID: FPUK157-14 Sample ID: RBGE300
Record Created: 2014-03-11 Museum ID:
Collection Code: Ian Hedge 1 Field ID: Ian Hedge 1
Deposited In: Royal Botanic Garden Edinburgh
Associated Datasets: DS-UKBOL | UK Barcode of Life
Specimen Linkout:
Checksum: dfa1fe0ebf9999677dc317c0ee86b015

Taxonomy

Kingdom: Plantae Subfamily: Orchidoideae
Phylum: Tracheophyta Tribe:
Class: Liliopsida Genus: Platanthera
Order: Asparagales Species: Platanthera bifolia
Family: Orchidaceae Scientific Name Authorship: (L.) Rich.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2013-06-18
Province/State: Scotland Collection Date End:
Region/County: Orkney Coord. Source:
Sector: South Uist, Isle of Coord. Accuracy:
Exact Site: Bornais Elevation:
Habitat: Elevation Accuracy:
Latitude: 57.239 Depth:
Longitude: -7.401 Depth Accuracy:
Sampling Protocol:
Collectors: Ian Hedge
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: North_Atlantic_moist_mixed_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/FPUK157-14
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AFPUK157-14&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AFPUK157-14&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsXILCPU2NDXXNTSxzsnMzSxJTQEAvCsLCQ==?length=3

AJAX URLs


                

            

        

    






    


    

        

            

                
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