Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | HGCAD070-10.COI-5P | GenBank Accession: | JF891212 |
|---|---|---|---|
| Primers Forward: | LepF1 (ATTCAACCAATCATAAAGATATTGG, LCO1490:GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | LepR1 (TAAACTTCTGGATGTCCAAAAAATCA, HCO2198:TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| AACTATTTACTTTATTTTTGGAATTTGAGCTGGAATAATCGGAACATCTCTTAGAATAATTATTCGAACTGAATTAGGTACAACTGAATCTTTAATCAAAAACGACCAAATCTATAATGTGCTTGTAACAGCCCATGCTTTTATTATAATTTTCTTCATAGTTATACCCATTATAATTGGAGGATTTGGAAATTGATTAGTTCCTCTTATAATCGGAGCTCCTGACATAGCCTTCCCCCGCATAAATAATATAAGATTTTGACTCCTCCCCCCCTCACTAAATCTTCTCCTAATTAGAGCCCTTGTAGAAAGAGGGACAGGAACAGGCTGAACTGTTTATCCCCCACTTTCTAGAAACTTAGCTCATGCAGGAAGATCCGTAGACATCTCTATTTTTTCCCTCCATTTAGCCGGAATTTCTTCTATTTTGGGAGCTATTAATTTTATCTCTACAACAATTAATATACGAAATAACTTAATAACTCTTGACCGTATCCCCCTATTTGTATGATCTGTGGCTATTACTGCCCTTCTTCTTCTTTTATCTTTACCAGTTTTAGCGGGAGCTATTACCATGCTACTTACCGACCGAAATTTAAATACTTCCTTTTTTGACCCCTCAGGCGGGGGAGACCCTATTCTATACCAACATTTATTT | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2011-01-24 | ||
Attribution
| Specimen Depository: | University of Pecs, Dept. of Ecology and Hydrobiology |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | None |
| Collectors: | Mladen Kusinic |
| Specimen Identification: | Mladen Kusinic |
Identifiers
| Process ID: | HGCAD070-10 | Sample ID: | MKR_03 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2010-09-02 | Museum ID: | ||||
| Collection Code: | Field ID: | MKR_03 | ||||
| Deposited In: | University of Pecs, Dept. of Ecology and Hydrobiology | |||||
| Associated Datasets: | DS-TRICH1 | Trichoptera Public Data | |||||
| Specimen Linkout: | ||||||
| Checksum: | 9f44dcd66657b2b2ee16dba278bfedff | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Limnephilinae |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Insecta | Genus: | Chaetopteryx |
| Order: | Trichoptera | Species: | Chaetopteryx rugulosa |
| Family: | Limnephilidae | Scientific Name Authorship: | |
| BIN ID: | BOLD:ABZ4696 | Subspecies: | Chaetopteryx rugulosa rugulosa |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | F | |
| Brief Note: | Life Stage: | A | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Croatia (HR) | Collection Date Start: | 2009-10-28 |
|---|---|---|---|
| Province/State: | Collection Date End: | ||
| Region/County: | Zumberak Mountains | Coord. Source: | |
| Sector: | Ribicka kuca | Coord. Accuracy: | |
| Exact Site: | Slapnica stream | Elevation: | 310 |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 45.70444 | Depth: | |
| Longitude: | 15.48611 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Mladen Kusinic | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Dinaric_Mountains_mixed_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/HGCAD070-10 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AHGCAD070-10&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AHGCAD070-10&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfJwd3Z0MTA30DU0sM7JzM0sSU0BAMQkCyA=?length=1