Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | HMTRI031-08.COI-5P | GenBank Accession: | KX103510 |
|---|---|---|---|
| Primers Forward: | LCO1490_t1 (TGTAAAACGACGGCCAGTGGTCAACAAATCATAAAGATATTGG) LepF1 (ATTCAACCAATCATAAAGATATTGG) MLepF1 (GCTTTCCCACGAATAAATAATA) | Primers Reverse: | HCO2198_t1 (CAGGAAACAGCTATGACTAAACTTCAGGGTGACCAAAAAATCA) LepR1 (TAAACTTCTGGATGTCCAAAAAATCA) MLepR1 (CCTGTTCCAGCTCCATTTTC) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| TCGTTAAGACTAATTATTCGGACTGAATTAGGAATACCAGGATCCTTAATTGGAAATGATCAAATTTATAATGTAATTGTAACTGCTCACGCATTTGTTATAATTTTTTTTATAGTTATACCTATTATAATTGGAGGATTTGGAAATTGATTGGTTCCTTTAATACTAGGAGCCCCAGATATAGCTTTTCCTCGAATAAATAATATAAGATTTTGACTTCTTCCCCCTTCTCTTACTTTACTTACAATAAGAATAATTGTAGAAAATGGAGCTGGAACTGGTTGAACTGTTTATCCCCCCTTATCATCTAACATTGGTCATAATGGAAGATCGGTTGATTTAACTATTTTTTCACTTCATTTAGCTGGAGTATCATCAATTTTAGGAGCTATTAATTTTATTACTACAGTAATTAATATACGTTCTAAAGGAATACATTTAGATCAAATACCCCTATTTGTTTGATCTGTAGCTATTACAGCTCTTCTTTTATTACTCTCCCTACCCGTATTAGCAGGAGCTATTACTATACTATTAACTGATCGAAATTTAAATACATCTTTTTTTGATCCCGCAGGAGGAGGAGATCC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 590 bp | ||
| Sequence Upload Date: | 2008-11-24 | ||
Attribution
| Specimen Depository: | University of Minnesota Insect Collection |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | H. Malicky |
| Specimen Identification: | Hans Malicky |
Identifiers
| Process ID: | HMTRI031-08 | Sample ID: | 08HMCAD-031 | |||
|---|---|---|---|---|---|---|
| Record Created: | Museum ID: | UMSP000124643 | ||||
| Collection Code: | Field ID: | Rb8 | ||||
| Deposited In: | University of Minnesota Insect Collection | |||||
| Associated Datasets: |
DS-TBOL | TBOL Master Dataset DS-TRICH1 | Trichoptera Public Data |
|||||
| Specimen Linkout: | ||||||
| Checksum: | 8adfe179e3d1bc4890af6ea4f8728e95 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Insecta | Genus: | Rhyacophila |
| Order: | Trichoptera | Species: | Rhyacophila balcanica |
| Family: | Rhyacophilidae | Scientific Name Authorship: | Radovanovic, 1953 |
| BIN ID: | BOLD:AAX9076 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | S | |
|---|---|---|---|
| Tissue Descriptor: | Sex: | M | |
| Brief Note: | Life Stage: | A | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Croatia (HR) | Collection Date Start: | 2007-06-05 |
|---|---|---|---|
| Province/State: | Collection Date End: | ||
| Region/County: | Rika Spring, Knin | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Elevation: | 300 | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 44.033 | Depth: | |
| Longitude: | 16.233 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | H. Malicky | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Illyrian_deciduous_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/HMTRI031-08 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AHMTRI031-08&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AHMTRI031-08&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfLwDQnyNDA21DWwsM7JzM0sSU0BAMciC1E=?length=1