Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: LOPHZ234-14.ITS2 GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
TGCAGAATTCCGCGAATCATCGAGTTTTTGAACGCAAGTTGCGCCCGAGGCTTTTACCGAGGGCATGTCTGTCTGAGCGTCCATGGGGTCCCGCTCATCCGCCTCGTCGTGTCGGCGAGGATTCATAGGATGGGCGCTGGGATGGCCTATGCGCGGACCATCCATTGGGCTCGCCCAAGGGAAAGTGTCCCGCTCGGCTGAAATCTATGTCCGTCCTGGAAATCGGAAGGGACGTTGCGAGAAGGTGCTCCGCTTTGCGAAAGTGGGCGGATGATATCATGGATGTCAATAGCACGCGACGCTCCCTTCCCTCTCGAAAGGACTTGGAAAAAACGGGACTCCCGTCGTCGCACGGGAGTTTTTCACGTCTTGGACCTCAGATCAGGCAAGATCACCCGCTGAGTTTAA
Locus: ITS2
Nucleotides: 408 bp
Sequence Upload Date: 2015-06-01

Sequence: rbcLa

Sequence ID: LOPHZ234-14.rbcLa GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
GGTGTTGGATTTAAAGCTGGTGTTAAAGATTATAAATTAACTTATTATACTCCAGAGTATAGGGTATTAGAAACCGATATTTTGGCAGCATTTCGTATGACCCCTCAACCTGGAGTACCACCAGAAGAGGCAGGAGCAGCGGTAGCTGCTGAATCTTCCACTGGTACTTGGACTACGGTTTGGACTGATGGACTTACAAGTCTTGATCGTTACAAAGGTCGCTGCTATGATATCGAACCTGTTTCTGGAGAAGATAATCAGTTTATTGCTTATGTAGCTTATCCATTAGATTTATTTGAAGAAGGTTCTGTTACTAACCTTTTCACTTCTATTGTAGGTAATGTTTTTGGATTCAAAGCTTTACGAGCTTTGCGTCTTGAAGATTTGAGAATTCCTCCGGCTTATGTAAAAACTTTTCAAGGTCCACCTCACGGTATCCAAGTTGAAAGAGATAAATTGAACAAATATGGTCGTCCTTTGTTGGGATGTACTATCAAACCAAAATTAGGTTTATCTGCCAAAAATTATGGTCGAGCTGTATATGAGTGTCTT
Locus: rbcLa
Nucleotides: 552 bp
Sequence Upload Date: 2015-04-01

Attribution

Specimen Depository: NTNU University Museum, Department of Natural History
Sequencing Center: Centre for Biodiversity Genomics
Photography: Erik Bostrom
Collectors: Kristian Hassel
Specimen Identification: Kristian Hassel

Identifiers

Process ID: LOPHZ234-14 Sample ID: CCDB-21453 D6
Record Created: 2014-12-08 Museum ID: 4182
Collection Code: Field ID:
Deposited In: NTNU University Museum, Department of Natural History
Associated Datasets:
Specimen Linkout:
Checksum: 0690554c6aa2d5ef9a71d538f1de6e39

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Marchantiophyta Tribe:
Class: Jungermanniopsida Genus: Frullania
Order: Frullaniales Species: Frullania tamarisci
Family: Frullaniaceae Scientific Name Authorship: (L.) Dumort.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Norway (NO) Collection Date Start: 2014-06-17
Province/State: Sogn og Fjordane Collection Date End:
Region/County: Flora Coord. Source:
Sector: Grondalen Coord. Accuracy:
Exact Site: Boulder in Betula forest Elevation:
Habitat: Elevation Accuracy:
Latitude: 61.695 Depth:
Longitude: 5.587 Depth Accuracy:
Sampling Protocol:
Collectors: Kristian Hassel
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Scandinavian_Montane_Birch_forest_and_grasslands

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/LOPHZ234-14
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ALOPHZ234-14&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ALOPHZ234-14&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfLxD_CIMjI20TU0sc7JzM0sSU0BAMfTC1w=?length=2

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