Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | MAMN2830-19.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | VF1_t1 (TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG, VF1d_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG, VF1i_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCAIAAIGAIATIGG) | Primers Reverse: | VR1_t1 (CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA, VR1d_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA, VR1i_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGICCIAAIAAICA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| GACCTTATATCTCCTATTTGGGGCCTGAGCAGGAATAGTCGGGACAGCCCTAAGCATCCTAATTCGAGCGGAACTTGGGCAACCAGGTGCTCTACTAGGTGACGACCAAATTTATAACGTAGTCGTCACAGCCCACGCATTTGTTATAATTTTCTTCATAGTAATACCAATAATAATCGGCGGGTTCGGTAACTGACTAGTCCCACTAATAATTGGAGCCCCCGACATAGCATTCCCACGAATGAACAACATAAGCTTCTGACTTCTACCCCCATCATTCCTTCTTCTCTTAGCCTCATCCATAGTAGAAGCAGGAGCTGGAACTGGCTGAACCGTTTACCCACCACTAGCCGGCAATTTAGCACACGCAGGAGCATCCGTAGACCTGACCATTTTTTCCCTGCACCTAGCAGGAGTCTCATCAATTTTAGGCGCCATTAACTTCATCACTACTATTATCAATATAAAACCACCAGCCATAACACAATATCAAACCCCCTTGTTCGTATGATCAGTCCTCATTACTGCTGTACTCCTCCTCCTCTCCCTCCCAGTCCTAGCCGCAGGCATTACAATACTCCTAACTGACCGAAATCTAAATACTACATTCTTTGACCCAGCCGGAGGCGGTGACCCCATTTTATACCAACACCTATTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2019-06-04 | ||
Attribution
| Specimen Depository: | NEON Biorepository at Arizona State University |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Laura D Steger |
| Collectors: | National Ecological Observatory Network, United States |
| Specimen Identification: | Laura Steger |
Identifiers
| Process ID: | MAMN2830-19 | Sample ID: | BART.20180814.R4501.E | |||
|---|---|---|---|---|---|---|
| Record Created: | 2019-04-18 | Museum ID: | BART.20180814.R4501.E | |||
| Collection Code: | NEON:MAMC-DNA | Field ID: | BART.20180814.R4501.E | |||
| Deposited In: | NEON Biorepository at Arizona State University | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | 209b18b4dbd75f9792967660c9b89b79 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Arvicolinae |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Mammalia | Genus: | Myodes |
| Order: | Rodentia | Species: | Myodes gapperi |
| Family: | Cricetidae | Scientific Name Authorship: | Vigors, 1830 |
| BIN ID: | BOLD:AAA3324 | Subspecies: | |
| Identification Method: | Morphology | ||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Vouchered:Registered Collection | Reproduction: | S |
|---|---|---|---|
| Tissue Descriptor: | ear punch | Sex: | M |
| Brief Note: | Life Stage: | adult | |
| Detailed Notes: | specimen:http://data.neonscience.org/home. Voucher measurements: totalLength: 132 mm, tailLength: 47 mm, hindfootLengthSU: 17 mm, hindfootLengthCU: 18 mm, earLength: 14 mm, weight: 19.8 g. | ||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2018-08-14 |
|---|---|---|---|
| Province/State: | New Hampshire | Collection Date End: | |
| Region/County: | Domain 01 | Coord. Source: | WGS84 |
| Sector: | Carroll | Coord. Accuracy: | 45.12 |
| Exact Site: | Bartlett Experimental Forest NEON | Elevation: | 447.21 |
| Habitat: | deciduousForest | Elevation Accuracy: | 0.17 |
| Latitude: | 44.057 | Depth: | |
| Longitude: | -71.309 | Depth Accuracy: | |
| Sampling Protocol: | ShermanLF | ||
| Collectors: | National Ecological Observatory Network, United States | ||
| Collection Note: | |||
Ecology
| Realm: | Nearctic |
|---|---|
| Biome: | |
| Ecoregion: | New_England-Acadian_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/MAMN2830-19 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AMAMN2830-19&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AMAMN2830-19&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfJ19PUzsjA20DW0tM7JzM0sSU0BAMUQCzE=?length=1