Collection Site(s)



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Sequence: COI-5P

Sequence ID: MAMN6199-21.COI-5P GenBank Accession:
Primers Forward: AquaF2 (ATCACRACCATCATYAAYATRAARCC) VF1_t1 (TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG, VF1d_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG, LepF1_t1:TGTAAAACGACGGCCAGTATTCAACCAATCATAAAGATATTGG, VF1i_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCAIAAIGAIATIGG) Primers Reverse: VR1_t1 (CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA, VR1d_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA, LepR1_t1:CAGGAAACAGCTATGACTAAACTTCTGGATGTCCAAAAAATCA, VR1i_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGICCIAAIAAICA)
Sequence Run Site: Centre for Biodiversity Genomics
GTTCTAATCACTGCTGTCCTTCTACTTCTTTCCCTCCCTGTTCTAGCTGCAGGAATTACAATACTTCTTATAGACTGAAATCTAAATACCACTTTCTTCGACCCAGCTCGAGGGGGCGACCCTATTCTCTATCAACACCTATTC
Locus: COI-5P
Nucleotides: 144 bp
Sequence Upload Date: 2021-07-14

Attribution

Specimen Depository: NEON Biorepository at Arizona State University
Sequencing Center: Centre for Biodiversity Genomics
Photography:
Collectors: National Ecological Observatory Network, United States
Specimen Identification: NEON Technician

Identifiers

Process ID: MAMN6199-21 Sample ID: BLAN.20200916.R4240.E
Record Created: 2021-04-21 Museum ID:
Collection Code: NEON:MAMC-DNA Field ID: BLAN.20200916.R4240.E
Deposited In: NEON Biorepository at Arizona State University
Associated Datasets:
Specimen Linkout:
Checksum: 1e68ab76d685f4b08c0f1c435437eae5

Taxonomy

Kingdom: Animalia Subfamily:
Phylum: Chordata Tribe:
Class: Genus:
Order: Species:
Family: Scientific Name Authorship:
BIN ID: Subspecies:
Identification Method: Morphology
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Vouchered:Registered Collection Reproduction: S
Tissue Descriptor: ear punch Sex: M
Brief Note: Life Stage: subadult
Detailed Notes:

Collection

Country/Ocean: United States (US) Collection Date Start: 2020-09-16
Province/State: Virginia Collection Date End:
Region/County: Domain 02 Coord. Source: WGS84
Sector: Clarke Coord. Accuracy: 45.17
Exact Site: Blandy Experimental Farm NEON Elevation: 128.58
Habitat: deciduousForest Elevation Accuracy: 0.26
Latitude: 39.089 Depth:
Longitude: -77.958 Depth Accuracy:
Sampling Protocol: ShermanLF
Collectors: National Ecological Observatory Network, United States
Collection Note:

Ecology

Realm: Nearctic
Biome: Temperate_Broadleaf_&_Mixed_Forest_simplify-0.001_buffered-0.018
Ecoregion: Appalachian-Blue_Ridge_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/MAMN6199-21
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AMAMN6199-21&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AMAMN6199-21&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfJ19PUzM7S01DUytM7JzM0sSU0BAMVmCzY=?length=1

AJAX URLs


                

            

        

    






    


    

        

            

                
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