Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | MAMN6964-22.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | VF1_t1 (TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG, VF1d_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG, LepF1_t1:TGTAAAACGACGGCCAGTATTCAACCAATCATAAAGATATTGG, VF1i_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCAIAAIGAIATIGG) | Primers Reverse: | VR1_t1 (CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA, VR1d_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA, LepR1_t1:CAGGAAACAGCTATGACTAAACTTCTGGATGTCCAAAAAATCA, VR1i_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGICCIAAIAAICA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| CACGCTCTACCTAATATTCGGAGCTTGGGCCGGCATGGTGGGAACCGGACTTAGCATTCTCATCCGTGCTGAACTAGGCCAGCCGGGGGCCTTATTAGGGGATGATCAGATTTATAATGTAGTTGTGACCGCTCATGCATTTGTTATAATTTTCTTTATGGTTATACCAATTATGATTGGGGGCTTTGGGAACTGACTGGTACCTCTAATGATTGGGGCCCCTGATATAGCCTTTCCTCGAATAAATAACATGAGCTTCTGACTTCTCCCCCCATCATTCCTACTTTTACTGGCGTCATCAATAGTAGAAGCTGGGGCCGGAACAGGCTGAACAGTGTATCCCCCGCTGGCCGGTAATTTGGCCCATGCCGGAGCCTCTGTGGACCTAACCATCTTCTCTCTCCACTTGGCAGGTGTGTCTTCAATCCTAGGGGCTATTAATTTTATTACTACTATTATTAATATGAAACCACCCGCAGTCTCACAATACCAGACTCCTTTATTTGTTTGATCAGTTTTAATCACAGCTGTATTATTACTGTTATCTCTCCCTGTCCTGGCTGCTGGCATCACAATGCTTCTAACAGATCGTAACCTAAATACAACATTTTTTGATCCTGCAGGTGGGGGAGACCCAATCCTGTATCAACACCTATTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2022-08-19 | ||
Attribution
| Specimen Depository: | Arizona State University |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Laura D Steger |
| Collectors: | National Ecological Observatory Network, United States |
| Specimen Identification: | Laura Steger |
Identifiers
| Process ID: | MAMN6964-22 | Sample ID: | CPER.20210406.775138.E | |||
|---|---|---|---|---|---|---|
| Record Created: | 2022-05-25 | Museum ID: | CPER.20210406.775138.E | |||
| Collection Code: | Field ID: | CPER.20210406.775138.E | ||||
| Deposited In: | Arizona State University | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | b012ce6d4077bd61fc5c7749c4fcb73c | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Perognathinae |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Mammalia | Genus: | Perognathus |
| Order: | Rodentia | Species: | Perognathus flavus |
| Family: | Heteromyidae | Scientific Name Authorship: | Baird, 1855 |
| BIN ID: | BOLD:ACQ8660 | Subspecies: | |
| Identification Method: | Morphology | ||
| Taxonomy Notes: | ID References: Armstrong, D.M., Fitzgerald, J.P. and Meaney, C.A., 2010. Mammals of Colorado. University Press of Colorado. ID Remarks: Antitragus of ear pinna not lobed; total length less than 120 mm; conspicuous buffy postauricular patch is roughly twice as large as the ear. | ||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Vouchered:Registered Collection | Reproduction: | S |
|---|---|---|---|
| Tissue Descriptor: | ear punch | Sex: | M |
| Brief Note: | Life Stage: | adult | |
| Detailed Notes: | Measurements associated with voucher specimen: totalLength: 111 mm, tailLength: 49 mm, hindfootLengthSU: 15 mm, hindfootLengthCU: 16 mm, earLength: 6.5 mm, weight: 8.5 g, testisLength: 7.1 mm, testisWidth: 4.7 mm. | ||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2021-04-06 |
|---|---|---|---|
| Province/State: | Colorado | Collection Date End: | |
| Region/County: | Central Plains Domain | Coord. Source: | WGS84 |
| Sector: | Weld | Coord. Accuracy: | 45.1 |
| Exact Site: | Central Plains Experimental Range NEON | Elevation: | 1647.13 |
| Habitat: | grasslandHerbaceous | Elevation Accuracy: | 0.1 |
| Latitude: | 40.868 | Depth: | |
| Longitude: | -104.704 | Depth Accuracy: | |
| Sampling Protocol: | ShermanXLK | ||
| Collectors: | National Ecological Observatory Network, United States | ||
| Collection Note: | |||
Ecology
| Realm: | Nearctic |
|---|---|
| Biome: | Temperate_Grasslands_Savannas_&_Shurblands_simplify-0.001_buffered-0.018 |
| Ecoregion: | Western_shortgrass_prairie |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/MAMN6964-22 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AMAMN6964-22&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AMAMN6964-22&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfJ19PUzszQz0TUyss7JzM0sSU0BAMV8Czc=?length=1