Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | MLALE018-09.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LCO1490 (GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | HCO2198 (TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| TACCTTATATTTCATCTTCGGAGCTTGAGCTGGTATAGTTGGAACCTCTTTAAGTTTAATCATTCGAGCAGAACTTAGACAACCAGGTAGTTTAATTGGTAATGATCAAATCTATAATGTTGTTGTTACAGCTCATGCTTTTGTTATAATCTTTTTTATAGTTATACCGATTATAATTGGTGGATTTGGAAACTGGCTTGTTCCTTTGATATTAGGAGCCCCAGATATAGCTTTTCCGCGAATAAATAATATAAGATTTTGACTTTTACCTCCCTCCTTATCTCTCTTACTTACAAGAAGAATAGTGGAAAGTGGTGTGGGCACCGGATGAACTGTCTACCCACCCCTCGCCGCCGCTATCGCTCATGCCGGAGCCTCAGTTGATTTAGGAATTTTTTCTCTTCACCTAGCGGGTGTTTCCTCAATCCTAGGAGCCGTTAATTTTATAACTACTGTTATCAACATACGCTCTTATGGTATGACAATAGACCAAATACCATTGTTTGTTTGAGCAGTCTTTATTACTGCTATCCTTCTCTTGCTTTCCTTACCTGTATTAGCAGGCGCTATTACTATATTATTAACTGACCGTAACTTAAATACTTCATTCTTTGATCCTGCTGGGGGGGGTGACCCTGTCCTCTACCAACATTTATTC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2012-03-02 | ||
Attribution
| Specimen Depository: | Universidade Nova de Lisboa, Instituto do Mar |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | None |
| Collectors: | Maria Helena Costa & Jorge Lobo |
| Specimen Identification: | Jorge Lobo Arteaga |
Identifiers
| Process ID: | MLALE018-09 | Sample ID: | LMBSST7-001 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2009-12-08 | Museum ID: | ||||
| Collection Code: | Field ID: | LMBSST12 | ||||
| Deposited In: | Universidade Nova de Lisboa, Instituto do Mar | |||||
| Associated Datasets: |
DS-GAIMARIN | Global Atlantic Iberia Marine Invertebrates with DNA barcodes DS-NISEUREF | Curated DNA barcode reference library for marine invertebrate NIS occurring in European Coastal Regions |
|||||
| Specimen Linkout: | ||||||
| Checksum: | 8e50b82c3d2a9c587724ee0039523624 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Malacostraca | Genus: | Pachygrapsus |
| Order: | Decapoda | Species: | Pachygrapsus marmoratus |
| Family: | Grapsidae | Scientific Name Authorship: | Fabricius, 1787 |
| BIN ID: | BOLD:AAE4277 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | A | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Portugal (PT) | Collection Date Start: | 2009-05-26 |
|---|---|---|---|
| Province/State: | Collection Date End: | ||
| Region/County: | Alentejo Litoral | Coord. Source: | |
| Sector: | Setubal | Coord. Accuracy: | |
| Exact Site: | Praia de Sao Torpes | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 37.91 | Depth: | |
| Longitude: | -8.8 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Maria Helena Costa & Jorge Lobo | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Southwest_Iberian_Mediterranean_sclerophyllous_and_mixed_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/MLALE018-09 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AMLALE018-09&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AMLALE018-09&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfL1cfRxNTC00DWwtM7JzM0sSU0BAMXTCz4=?length=1