Sequence: COI-5P
| Sequence ID: | MSA026-12.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LepF1 (ATTCAACCAATCATAAAGATATTGG, LCO1490:GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | LepR1 (TAAACTTCTGGATGTCCAAAAAATCA, HCO2198:TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| AACCTTATATTTTATCTTGGGCATTTGAGCTGGAATGGTAGGAGCAGGCATAAGATTATTAATCCGAATTGAACTAAGCCAACCCGGAGCATTTCTAGGAAGAGATCAACTATATAACACTATCGTAACAGCCCACGCATTTGTTATAATTTTCTTTTTAGTAATACCCGTATTTATTGGAGGATTTGGAAACTGACTCCTTCCTCTCATACTAGGAGCACCTGACATAGCCTTTCCTCGACTAAATAATATAAGGTTTTGACTATTACCCCCATCCCTAATTCTTCTTGTATCCTCCGCAGCTGTAGAGAAGGGAGCGGGAACGGGTTGAACAGTATACCCACCTCTTGCAAGAAACTTGGCTCATGCTGGGCCATCAGTAGACTTAGCTATTTTCTCCCTTCACTTAGCTGGAGCCTCTTCAATTTTAGGTGCAATTAATTTTATTACTACAGTTATCAATATACGATGATCGGGACTACGACTAGAGCGAATTCCCCTATTTGTCTGAGCTGTACTAATTACAGTTATTCTACTTCTCCTGTCACTGCCTGTATTAGCCGGGGCAATTACTATACTTTTAACAGACCGAAATTTAAATACATCATTTTTTGATCCTGCGGGAGGGGGTGATCCAATTTTATACCAACACCTTTTT | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2012-11-21 | ||
Attribution
| Specimen Depository: | KwaZulu-Natal Museum |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | M. Ziganira |
| Collectors: | T Nxele, L Hartman, S Mkhize, L Bambalele |
| Specimen Identification: | BOLD Identification System [2018] |
Identifiers
| Process ID: | MSA026-12 | Sample ID: | NMSA-OLIG.06311 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2012-09-07 | Museum ID: | ||||
| Collection Code: | Field ID: | 06311 | ||||
| Deposited In: | KwaZulu-Natal Museum | |||||
| Associated Datasets: | DS-MTWA | Worldwide Annelida COI records | |||||
| Specimen Linkout: | ||||||
| Checksum: | 3c763659b4f57e2da7811133c67677a4 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Annelida | Tribe: | |
| Class: | Clitellata | Genus: | Dendrobaena |
| Order: | Crassiclitellata | Species: | Dendrobaena octaedra |
| Family: | Lumbricidae | Scientific Name Authorship: | |
| BIN ID: | BOLD:ABZ5406 | Subspecies: | |
| Identification Method: | BOLD ID Engine | ||
| Taxonomy Notes: | Identified to family by Thembeka Nxele | ||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | |||
Collection
| Country/Ocean: | South Africa (ZA) | Collection Date Start: | 2012-02-14 |
|---|---|---|---|
| Province/State: | KwaZulu-Natal | Collection Date End: | |
| Region/County: | Coord. Source: | ||
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Karkloof Nature Reserve | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | Depth: | ||
| Longitude: | Depth Accuracy: | ||
| Sampling Protocol: | |||
| Collectors: | T Nxele, L Hartman, S Mkhize, L Bambalele | ||
| Collection Note: | |||
Ecology
| Realm: | |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/MSA026-12 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AMSA026-12&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AMSA026-12&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfINdjQwMtM1NLLOyczNLElNAQCwggqt?length=1