Specimen Images



Collection Site(s)



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Sequence: ITS

Sequence ID: NAMPA2197-22.ITS GenBank Accession:
Primers Forward: ITS1-F (CTTGGTCATTTAGAGGAAGTAA) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC)
Sequence Run Site: Centre for Biodiversity Genomics
AAGGATCATTATTGAATAAACCTGGCTTGGTTGATGCTGGTCTTTTCGGAGACATGTGCACACCTTGTCATCTTTATATCTCCACCTGTGCACCTTTTGTAGACCTGGATTCAACTTTCCGAGGAAACTCGGTTGTGAGGAATTGCTTAATAGGCTTTCCTTGTTAGTTTCCAGGGCTATGTTTTCATATACACCTTACGAATGTAACAGAATGTCATTATTAGGCTTAATTGCCTTATAAACTATATACAACTTTCAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATTAAATTCTCAACCTTTATTAACTTTTTGGTTAGTAAGTGGATTGGAAGTGGGGGCATGTTGGTTTCTTCATTGAAATAAACTCCCCTGAAATGCATTAGCTGGTTGCCTTGTGCGAACATGTCTATTGGTGTGATAATTATCTACGCCGTGGGCTATTTGCCGTTTATAGCACTGCTTATAATCGTCTGTTCATTCAGACAATATATGACAATTTGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAA
Locus: ITS
Nucleotides: 656 bp
Sequence Upload Date: 2022-04-11

Attribution

Specimen Depository: Private Collection of Autumn Anglin
Sequencing Center: Centre for Biodiversity Genomics
Photography: Autumn Anglin
Collectors: Autumn Anglin
Specimen Identification:

Identifiers

Process ID: NAMPA2197-22 Sample ID: iNat86782711
Record Created: 2022-01-27 Museum ID:
Collection Code: Field ID: iNat86782711
Deposited In: Private Collection of Autumn Anglin
Associated Datasets: DS-WVM1207A | WVMS Mycoflora Fungal Diversity Survey (FunDiS) 1207
Specimen Linkout:
Checksum: 4480b72d66544d993178f94c7c9b62e1

Taxonomy

Kingdom: Fungi Subfamily:
Phylum: Basidiomycota Tribe:
Class: Agaricomycetes Genus: Hypholoma
Order: Agaricales Species: Hypholoma fasciculare
Family: Strophariaceae Scientific Name Authorship:
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: United States (US) Collection Date Start: 2021-07-09
Province/State: Oregon Collection Date End:
Region/County: Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Elevation:
Habitat: Elevation Accuracy:
Latitude: 45.231 Depth:
Longitude: -123.796 Depth Accuracy:
Sampling Protocol:
Collectors: Autumn Anglin
Collection Note:

Ecology

Realm: Nearctic
Biome: Temperate_Conifer_Forest_simplify-0.001_buffered-0.018
Ecoregion: Central_Pacific_Northwest_coastal_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/NAMPA2197-22
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ANAMPA2197-22&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ANAMPA2197-22&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfJz9A1wNDK0NNc1MrLOyczNLElNAQDQCwt1?length=1

AJAX URLs


                

            

        

    






    


    

        

            

                
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