Specimen Images



Collection Site(s)



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Sequence: ITS

Sequence ID: NAMPA2219-22.ITS GenBank Accession:
Primers Forward: ITS1-F (CTTGGTCATTTAGAGGAAGTAA) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC)
Sequence Run Site: Centre for Biodiversity Genomics
AAGGATCATTATCGAAGAGCAACTCTTCATACACCCTGTGAACTGTCGTCTTAGGACGCAATATAAACTCTAGTGTTGTCAATGAAAGTGTTATACCATAACAAGCATAACTTTTAGCAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCCTTTTGGGTTCGCCCTGGGCATGCTGGTTTGAGCGCCTTAATAGTCTTGTGCTAGCTTGCTAGTGCAGATATGAGTGTTGCCGTTGGCTCGCTCTGAATGCATCAGCGGTTAGAAAGCTGGAGCAACGTGATAAGTATTTCGTTGTGATAGCCCTATAGCCGCTTCAAATCGTCCTCGGACAATTTCAAGTGCTAGGCCTCAAATTAGTAGGATTACCCGCTGAACTTAA
Locus: ITS
Nucleotides: 454 bp
Sequence Upload Date: 2022-04-11

Attribution

Specimen Depository: Private Collection of Autumn Anglin
Sequencing Center: Centre for Biodiversity Genomics
Photography: Autumn Anglin
Collectors: Autumn Anglin
Specimen Identification:

Identifiers

Process ID: NAMPA2219-22 Sample ID: iNat98385263
Record Created: 2022-01-27 Museum ID:
Collection Code: Field ID: iNat98385263
Deposited In: Private Collection of Autumn Anglin
Associated Datasets: DS-WVM1207A | WVMS Mycoflora Fungal Diversity Survey (FunDiS) 1207
Specimen Linkout:
Checksum: 8929a34faee1a70ed386aacc37f74b14

Taxonomy

Kingdom: Fungi Subfamily:
Phylum: Basidiomycota Tribe:
Class: Dacrymycetes Genus: Calocera
Order: Dacrymycetales Species: Calocera cornea
Family: Dacrymycetaceae Scientific Name Authorship: (Batsch) Fr. 1827
BIN ID: Subspecies:
Identification Method: ITS
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: United States (US) Collection Date Start: 2021-10-15
Province/State: Oregon Collection Date End:
Region/County: Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Elevation:
Habitat: Elevation Accuracy:
Latitude: 44.655 Depth:
Longitude: -123.234 Depth Accuracy:
Sampling Protocol:
Collectors: Autumn Anglin
Collection Note:

Ecology

Realm: Nearctic
Biome: Temperate_Grasslands_Savannas_&_Shurblands_simplify-0.001_buffered-0.018
Ecoregion: Willamette_Valley_oak_savanna

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/NAMPA2219-22
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ANAMPA2219-22&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ANAMPA2219-22&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfJz9A1wNDIytNQ1MrLOyczNLElNAQDPyQtw?length=1

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