Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | NIB061-21.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | GasF1_t1 (TGTAAAACGACGGCCAGTTTTCAACAAACCATAARGATATTGG, GasF2_t1:TGTAAAACGACGGCCAGTATTCTACAAACCACAAAGACATCGG, GasF3_t1:TGTAAAACGACGGCCAGTTTTCWACWAATCATAAAGATATTGG) | Primers Reverse: | GasR1_t1 (CAGGAAACAGCTATGACACTTCWGGRTGHCCRAARAATCARAA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| TAATTCGAACAGAACTTTCACAAACTAGACAAATTATTAGAAATAGGCAAATTTATAATGTTATTGTTACTGCCCATGCTCTGATTATAATTTTTTTTTTTGTTATACCTACTTTAATTAGGGGTTTTAGAAATTGATTGTTGCCTTTAATAATTAGAGCTCCAGATATAGCCTTCCCACGTTTAAATAATATAAGTTTTTGACTCCTGCCTCCTTCTTTATTCCTTCTTGGTCTTTCAACTTTTATTAGAGATGGTGTAGGTACTAGGTGAACCATTTATCCTCCCTTATCTTCTATTTTAGCTCACTCAAGTCCAGCTGTGGATTTAGGTATTTTTTCTTTACATTTAGCAGGTATTTCTTCTATCTTNAGATCTATAAATTTTTTAGTTACTTTAAGAAACATAAAATNTAAAGGTATGAACTTTTCCANNTNTCCTCTTTTTATTTGATCTATTATTATTACTACAATTTTACTTATTCTTTCTTTACCTGTTTTAGCAGCTGCTATTACTATATTATTATTTGACCGAAATTTAAATACTAGTT | |||
| Locus: | COI-5P | ||
| Nucleotides: | 549 bp | ||
| Sequence Upload Date: | 2021-04-09 | ||
Attribution
| Specimen Depository: | Senckenberg Research Institute and Natural History Museum |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Picton, B.E. |
| Collectors: | Christine Morrow, Bernard Picton, Julia Sigwart |
| Specimen Identification: | Christine Morrow |
Identifiers
| Process ID: | NIB061-21 | Sample ID: | NIB_CCM_0061 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2021-03-03 | Museum ID: | ||||
| Collection Code: | Field ID: | NIB_CCM_0061 | ||||
| Deposited In: | Senckenberg Research Institute and Natural History Museum | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | aab17ff5ada78311b08cb8e950ba24ee | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Ascidiacea | Genus: | Polyclinum |
| Order: | Aplousobranchia | Species: | Polyclinum aurantium |
| Family: | Polyclinidae | Scientific Name Authorship: | |
| BIN ID: | BOLD:AED4895 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | ||
| Brief Note: | Life Stage: | ||
| Detailed Notes: | Polyclinum aurantium on Genbank is different, Florida, India specimens? | ||
Collection
| Country/Ocean: | Ireland (IE) | Collection Date Start: | 2021-01-19 |
|---|---|---|---|
| Province/State: | Ulster | Collection Date End: | |
| Region/County: | Coord. Source: | ||
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Elevation: | 0.6 | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 54.394 | Depth: | |
| Longitude: | -5.578 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Christine Morrow, Bernard Picton, Julia Sigwart | ||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Celtic_broadleaf_forests |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/NIB061-21 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ANIB061-21&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ANIB061-21&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfLzdDIwM9Q1MrTOyczNLElNAQCv-wqk?length=1