Specimen Images



Collection Site(s)



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Sequence: ITS

Sequence ID: NOBAS5889-18.ITS GenBank Accession:
Primers Forward: ITS1-F (CTTGGTCATTTAGAGGAAGTAA) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC)
Sequence Run Site: Centre for Biodiversity Genomics
aagtcgtaacaaggtttccgtaggtgaacctgcggaaggatcattactgaagtgatttggagatgttgctggcctctctcgggaggcaatgtgcactctccaaaacaattcacgatttccatcacaccccttgtgcacatcctgtagggcaatgtcaccccctctcgaagttggggctgttgtcctatgtattctctcatctcacacatttcgaatggtgctcttggatgcatcttgtggattatttgtaacaaagtaatcataaaaacaactttcaacaatggatctcttggctctcgcatcgatgaagaacgcagcgaaatgcgatacgtaatgtgaattgcagaattccgtgaatcatcgaatctttgaacgcaccttgcgcctcttggtattccgaggggcatgcctgtttgagtgtcatgaaatcatcaatgaggacctttcttttcggagagaggctttcttgttggaatgtggagtgtgctggcttgttcagctcctctgaaatgcattagcgatgtggtgttccacctgcttgagcttgcattggcattgatagtcattcatgtcagagtagttcatctgtggaaaggttcacttgctcctaattgtgatggactctctctccatcctttgacccatataacctcaaatcaggcaggactacccgctgaacttaa
Locus: ITS
Nucleotides: 683 bp
Sequence Upload Date: 2018-07-12

Attribution

Specimen Depository: Tromso University Museum
Sequencing Center: Centre for Biodiversity Genomics
Photography: Marie Foreid Merkel
Collectors: Geir Mathiassen
Specimen Identification: Per Marstad

Identifiers

Process ID: NOBAS5889-18 Sample ID: TROM-F-14083
Record Created: 2018-04-10 Museum ID: TROM-F-14083
Collection Code: Field ID:
Deposited In: Tromso University Museum
Associated Datasets:
Specimen Linkout:
Checksum: a318f2500f29232c4f0e608a618c39ff

Taxonomy

Kingdom: Fungi Subfamily:
Phylum: Basidiomycota Tribe:
Class: Agaricomycetes Genus: Hygrocybe
Order: Agaricales Species: Hygrocybe acutoconica
Family: Hygrophoraceae Scientific Name Authorship:
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes: Hygrocybe acutoconica (Clem.) Singer
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Norway (NO) Collection Date Start: 2004-08-17
Province/State: Finnmark Collection Date End:
Region/County: Alta Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Alta: Talvik, pa tur opp til granskogen. Elevation:
Habitat: Elevation Accuracy:
Latitude: 70.0487 Depth:
Longitude: 22.9566 Depth Accuracy:
Sampling Protocol:
Collectors: Geir Mathiassen
Collection Note:

Ecology

Realm:
Biome:
Ecoregion:

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/NOBAS5889-18
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ANOBAS5889-18&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ANOBAS5889-18&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfLzd3IMNrWwsNQ1tLDOyczNLElNAQDRNguL?length=1

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