Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | NOMAM172-17.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | VF1_t1 (TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG, VF1d_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG, LepF1_t1:TGTAAAACGACGGCCAGTATTCAACCAATCATAAAGATATTGG, VF1i_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCAIAAIGAIATIGG) | Primers Reverse: | VR1_t1 (CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA, VR1d_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA, LepR1_t1:CAGGAAACAGCTATGACTAAACTTCTGGATGTCCAAAAAATCA, VR1i_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGICCIAAIAAICA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| AACATTATATCTCTTATTTGGTGCCTGAGCTGGAATAGTAGGTACAGCCCTTAGTTTACTAATTCGAGCTGAACTGGGTCAACCCGGAGCCTTACTAGGAGATGATCAAATTTATAATGTAGTTGTTACTGCACATGCATTTGTTATAATTTTCTTCATAGTTATACCTATCATAATTGGTGGATTTGGAAATTGACTAGTTCCATTGATAATTGGAGCCCCTGACATAGCATTTCCCCGAATAAATAATATAAGCTTCTGACTTCTTCCTCCCTCATTTCTCCTGCTCCTAGCATCGTCAATAGTGGAAGCAGGCGCTGGGACTGGGTGAACCGTTTACCCTCCTCTAGCAGGTAATCTAGCCCATGCAGGAGCCTCAGTAGATCTAACTATTTTCTCACTCCACCTGGCAGGTGTTTCCTCCATCTTAGGGGCAATTAATTTTATTACTACTATTATCAATATAAAACCACCCGCTATATCCCAATATCAAACCCCCCTGTTTGTCTGATCAGTCCTAATTACAGCTGTACTGTTACTTCTTTCACTTCCAGTCCTTGCAGCAGGAATTACCATACTTTTAACTGACCGAAATTTAAATACAACTTTCTTTGACCCGGCTGGGGGAGGAGACCCTATTCTATATCAACACTTATTT | |||
| Locus: | COI-5P | ||
| Nucleotides: | 658 bp | ||
| Sequence Upload Date: | 2017-06-02 | ||
Attribution
| Specimen Depository: | University of Oslo, Natural History Museum |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | |
| Specimen Identification: |
Identifiers
| Process ID: | NOMAM172-17 | Sample ID: | NHMO-DMA-419 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2017-03-14 | Museum ID: | 11364 | |||
| Collection Code: | NHMO | Field ID: | ||||
| Deposited In: | University of Oslo, Natural History Museum | |||||
| Associated Datasets: |
DS-EBACMAMM | Mammalia for eDNA Detection DS-MHKASIA | Mamalia Asia (-Indonesia) DS-WSNOR | Public Norwegian data for use in the Analyzing Urban Biodiversity Workshop at IBOL 2019 |
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| Specimen Linkout: | ||||||
| Checksum: | 50776d51fb73f1df4294e7db4f32a4b3 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | Sciurinae |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Mammalia | Genus: | Sciurus |
| Order: | Rodentia | Species: | Sciurus vulgaris |
| Family: | Sciuridae | Scientific Name Authorship: | Linnaeus, 1758 |
| BIN ID: | BOLD:AAE9374 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | M | |
| Brief Note: | Life Stage: | Adult | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Norway (NO) | Collection Date Start: | 1999-02-15 |
|---|---|---|---|
| Province/State: | Hedmark | Collection Date End: | |
| Region/County: | Amot | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Fiskebekklia | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 61.03078 | Depth: | |
| Longitude: | 11.28567 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | |||
| Collection Note: | |||
Ecology
| Realm: | Palearctic |
|---|---|
| Biome: | |
| Ecoregion: | Scandinavian_and_Russian_taiga |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/NOMAM172-17 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ANOMAM172-17&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ANOMAM172-17&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfLz93X0NTQ30jU0t87JzM0sSU0BAMa8C0s=?length=1