Collection Site(s)
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Sequence: 16S
| Sequence ID: | NWPHA223-20.16S | GenBank Accession: | OM782595 |
|---|---|---|---|
| Primers Forward: | 16S SF (GACCGTGCTAAGGTAGCATAATC) dgLCO-1490 (GGTCAACAAATCATAAAGAYATYGG) | Primers Reverse: | 16S SR (CCGGTCTGAACTCAAATCGTG) dgHCO-2198 (TAAACTTCAGGGTGACCAAARAAYCA) |
| Sequence Run Site: | LGC Genomics, Germany | ||
| ATTAGGCTTGTCATATAAGTCTGGAATGATTGGGTTAATGATTTTCTAGCTATC-TAGTTTACG-AGGAGAATTTTATAGTTAAGTCAAAAAGCTTAACT-TCTTAGAGGGACGATAAGACCCTATAAAGCTTT-ATCTAAAAGTG---------TTTTTAAAGAAGG-----AAAAAGGCCGGAGGATTAAGCTGGGGCGGCTATTAAG--TTTCTTTAATTTAA-GTAACA--GGATTGGTGAAATTGTAGATCTCTAA--AGAGTTAGAACAAGCTACTTTAGGGATAACAGCGCAATTTTCTTAGAGAGATCTTATCGATAGGAAAGACTTGTGACCTCGATGTTGAA-----------------TTGAGGGGC---------------------------------------------------------CTAAATTAAGCAGGCATAATTT--TAGGGAGTCTGTTCGACTTTTAAATCCTCA | |||
| Locus: | 16S | ||
| Nucleotides: | 489 bp | ||
| Sequence Upload Date: | 2020-11-17 | ||
Sequence: COI-5P
| Sequence ID: | NWPHA223-20.COI-5P | GenBank Accession: | Pending (#8202) |
|---|---|---|---|
| Primers Forward: | 16S SF (GACCGTGCTAAGGTAGCATAATC) dgLCO-1490 (GGTCAACAAATCATAAAGAYATYGG) | Primers Reverse: | 16S SR (CCGGTCTGAACTCAAATCGTG) dgHCO-2198 (TAAACTTCAGGGTGACCAAARAAYCA) |
| Sequence Run Site: | LGC Genomics, Germany | ||
| AGATCAAATTTATAACGTTATTGTCACAGCACACGCCTTTGTTATAATCTTCTTCATGGTTATACCAATTATAATTGGGGGATTTGGTAATTGGTTGATTCCTCTGATGTTGGGGGCCCCGGACATAGCATTTCCCCGGATAAACAACATAAGATTTTGACTTCTGCCCCCTTCTCTCACTCTTCTCTTAGTCAGGGGGCTTGTTGAAAGAGGGGCCGGGACCGGCTGAACCGTCTACCCCCCTTTGGCCTCCAATATTGCGCATAGGGGCCCTTCTGTGGATTTAGCCATCTTTTCTCTTCATCTCGCAGGGGCCTCCTCAATCTTAGGCTCCGTAAATTTCATCTCAACGGTTATTAATATGCGTGCCCCTGGAATAACCTTCGATAAAGTGCCTTTATTTGTTTGGTCTGTCTTTATTACTACTATTCTTCTTCTGTTGTCTCTTCCTGTTTTAGCAGGAGCTATTACTATATTACTCACAGATCGGAATTTAAACACCTCTTTCTTCGACCCC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 517 bp | ||
| Sequence Upload Date: | 2020-11-17 | ||
Attribution
| Specimen Depository: | Senckenberg Research Institute and Natural History Museum |
|---|---|
| Sequencing Center: | LGC Genomics, Germany |
| Photography: | |
| Collectors: | Malyutina, Brandt |
| Specimen Identification: | Henry Knauber |
Identifiers
| Process ID: | NWPHA223-20 | Sample ID: | SKBHap04 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2020-11-17 | Museum ID: | ||||
| Collection Code: | Field ID: | SKBHap04 | ||||
| Deposited In: | Senckenberg Research Institute and Natural History Museum | |||||
| Associated Datasets: | DS-NWPHA22 | Northwest Pacific Haploniscidae (Crustacea: Isopoda) | |||||
| Specimen Linkout: | ||||||
| Checksum: | aa9ce8dfe032ed5e9875779f4c5ce850 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Malacostraca | Genus: | Haploniscus |
| Order: | Isopoda | Species: | Haploniscus sp. SO |
| Family: | Haploniscidae | Scientific Name Authorship: | |
| BIN ID: | BOLD:AEG0150 | Subspecies: | |
| Identification Method: | Morphology | ||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Museum Vouchered:Type | Reproduction: | S |
|---|---|---|---|
| Tissue Descriptor: | leg | Sex: | F |
| Brief Note: | Life Stage: | subadult | |
| Detailed Notes: | |||
Collection
| Country/Ocean: | Pacific Ocean () | Collection Date Start: | 2015-07-26 |
|---|---|---|---|
| Province/State: | Collection Date End: | ||
| Region/County: | Sea of Okhotsk, Kuril Basin | Coord. Source: | |
| Sector: | SKB_A9 | Coord. Accuracy: | |
| Exact Site: | SKB_9-7 | Elevation: | -3371 |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 46.269 | Depth: | 3371 |
| Longitude: | 152.052 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | Malyutina, Brandt | ||
| Collection Note: | |||
Ecology
| Realm: | |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/NWPHA223-20 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ANWPHA223-20&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ANWPHA223-20&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfILD_BwNDIy1jUysM7JzM0sSU0BAMbfC0g=?length=2