Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | OOBKY1199-19.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | LepF1 (ATTCAACCAATCATAAAGATATTGG, LCO1490:GGTCAACAAATCATAAAGATATTGG) | Primers Reverse: | LepR1 (TAAACTTCTGGATGTCCAAAAAATCA, HCO2198:TAAACTTCAGGGTGACCAAAAAATCA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| AACTTTGTATCTAATAGCAGGTGCATGGTCCGGCATAGTAGGCACTGGATTAAGAATAATTATTCGTTTGGAACTTGGACAAGCAGGCTCTTTAATTGGAGATGATCAAATTTATAATGTGGTTGTTACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATACCTATTTTAATTGGAGGTTTTGGTAATTGATTGGTTCCTCTTATATTAGGAGCTGCAGACATAGCTTTTCCTCGTATAAATAATATAAGATTTTGATTTTTGATACCTGCATTAATTATACTTCTTTCAAGATCTCTAGTAGAAAGAGGTGCAGGTACAGGGTGAACAGTTTATCCTCCTTTATCGAGAAATATTGCACATGCAGGAGGTTCTGTAGATTTTGCAATTTTTTCATTACATTTAGCAGGAGTAAGATCTATTTTAGGGGCTGTAAATTTTATTAGAACTTTAGGTAATTTACGTGTATTTGGTATACTTTTAGATCGAATTCCTCTTTTTGCTTGATCGGTGTTAGTCACAGCTATTTTATTATTATTATCACTTCCAGTTTTAGCTGGAGCTATTACAATGCTTCTTACAGATCGTAATCTAAATACTTCTTTCTATGATGTAGGAGGAGGTGGAGATCCAATTTT | |||
| Locus: | COI-5P | ||
| Nucleotides: | 642 bp | ||
| Sequence Upload Date: | 2019-12-20 | ||
Attribution
| Specimen Depository: | Fisheries and Oceans Canada, Institute of Ocean Sciences |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | Julian Smith |
| Collectors: | OSU |
| Specimen Identification: | Julian AC Smith |
Identifiers
| Process ID: | OOBKY1199-19 | Sample ID: | OSU2019099-012 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2019-10-30 | Museum ID: | ||||
| Collection Code: | Field ID: | OSU2019099-012 | ||||
| Deposited In: | Fisheries and Oceans Canada, Institute of Ocean Sciences | |||||
| Associated Datasets: | ||||||
| Specimen Linkout: | ||||||
| Checksum: | f3e4329f086d0c82e4fffefef826f3db | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Copepoda | Genus: | Ctenocalanus |
| Order: | Calanoida | Species: | Ctenocalanus vanus |
| Family: | Calanidae | Scientific Name Authorship: | Giesbrecht, 1888 |
| BIN ID: | BOLD:ACB5069 | Subspecies: | |
| Identification Method: | Morphology | ||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | F | |
| Brief Note: | Life Stage: | ||
| Detailed Notes: | VI | ||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2019-04-11 |
|---|---|---|---|
| Province/State: | Oregon | Collection Date End: | |
| Region/County: | Coord. Source: | Ship NMEA feed | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | NH05 | Elevation: | |
| Habitat: | Elevation Accuracy: | ||
| Latitude: | 46.5 | Depth: | 60 |
| Longitude: | -124.18 | Depth Accuracy: | |
| Sampling Protocol: | Oblique Plankton Tow | ||
| Collectors: | OSU | ||
| Collection Note: | |||
Ecology
| Realm: | |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/OOBKY1199-19 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AOOBKY1199-19&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AOOBKY1199-19&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsfL3d_KONDS0tNQ1tLTOyczNLElNAQDRzAuT?length=1