Collection Site(s)
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Sequence: COI-5P
| Sequence ID: | PBCB039-17.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | jgLCO1490M13 (CACGACGTTGTAAAACGACTITCIACIAAYCAYAARGAYATTGG) | Primers Reverse: | jgHCO2198M13 (GGATAACAATTTCACACAGGTIAACYTCIGGRTGICCRAARAAYCA) |
| Sequence Run Site: | Ocean Genome Legacy | ||
| AACATTATATTTTATTTTTGGGGCGTGGGCTGGCGCAGTAGGGACAGCTTTAAGGATGATTATTCGTACGGAGTTAGGACAACCTGGGAGTTTTATTGGAGATGATCAGATTTATAATGTAGTAGTTACAGCTCACGCTTTTGTAATAATTTTCTTTATAGTAATACCTGTAATAATTGGCGGGTTTGGTAATTGGCTGGTCCCTTTGATGTTGGGGGCTCCAGATATAGCTTTCCCGCGGATAAATAATATAAGCTTTTGGTTACTCCCCCCTTCCCTTATACTGTTGCTCAGGAGGGGGTTAGTAGAGAGGGGTGTTGGAACAGGGTGAACTGTATACCCTCCACTTGCGGCAGGTATTGCGCATAGGGGAGCCTCTGTGGATTTGGGAATTTTCTCTTTACATTTGGCTGGGGCTTCTTCTATTTTAGGGGCTGTCAACTTTATTACAACTGTTATTAATATGCGCCCAGCGGGAATAAGATTTGATCGTATTCCGCTATTTGTGTGATCTGTTTTTATTACAGCAGTTCTTTTACTCTTATCCCTCCCAGTACTGGCCGGAGCTATTACTATACTTTTAACAGACCGTAACCTAAATACCTCTTTTTTTGACCCTAGAGGAGGAGGGGACCCTATTTTGTAC | |||
| Locus: | COI-5P | ||
| Nucleotides: | 646 bp | ||
| Sequence Upload Date: | 2017-12-18 | ||
Attribution
| Specimen Depository: | Ocean Genome Legacy |
|---|---|
| Sequencing Center: | Ocean Genome Legacy |
| Photography: | Ocean Genome Legacy |
| Collectors: | PBCB Bioblitz 2017 |
| Specimen Identification: |
Identifiers
| Process ID: | PBCB039-17 | Sample ID: | S24512 | |||
|---|---|---|---|---|---|---|
| Record Created: | 2017-12-05 | Museum ID: | OGL-S24512-A30099-E26894 | |||
| Collection Code: | Field ID: | |||||
| Deposited In: | Ocean Genome Legacy | |||||
| Associated Datasets: | DS-HACK2019 | Marine hackathon Norway 2019 | |||||
| Specimen Linkout: | ||||||
| Checksum: | c447fae425345d025eeff1f76680b22f | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Arthropoda | Tribe: | |
| Class: | Malacostraca | Genus: | Idotea |
| Order: | Isopoda | Species: | Idotea balthica |
| Family: | Idoteidae | Scientific Name Authorship: | Pallas, 1772 |
| BIN ID: | BOLD:ADB2394 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | E-Vouchered:DNA/Tissue+Photo | Reproduction: | |
|---|---|---|---|
| Tissue Descriptor: | cross-section | Sex: | |
| Brief Note: | Life Stage: | ||
| Detailed Notes: | Tissue and DNA samples available upon request at https://www.northeastern.edu/ogl/request/ | ||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | 2017-05-25 |
|---|---|---|---|
| Province/State: | Massachusetts | Collection Date End: | |
| Region/County: | Barnstable County | Coord. Source: | |
| Sector: | Pleasant Bay, Atlantic Ocean | Coord. Accuracy: | |
| Exact Site: | Pleasant Bay Community Boating | Elevation: | |
| Habitat: | Intertidal Zone | Elevation Accuracy: | |
| Latitude: | 41.7296 | Depth: | |
| Longitude: | -69.9916 | Depth Accuracy: | |
| Sampling Protocol: | |||
| Collectors: | PBCB Bioblitz 2017 | ||
| Collection Note: | |||
Ecology
| Realm: | Nearctic |
|---|---|
| Biome: | |
| Ecoregion: | Atlantic_coastal_pine_barrens |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/PBCB039-17 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APBCB039-17&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APBCB039-17&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQpwcnYyMLbUNTS3zsnMzSxJTQEAulUK7A==?length=1