Collection Site(s)



Legend
1+
10+
100+
1000+
10000+

Sequence: 28S

Sequence ID: PGCNA011-21.28S GenBank Accession:
Primers Forward: 28S-Far_M13 (TGTAAAACGACGGCCAGTCACGAGACCGATAGCGAACAAGTA) ITSc2-5_M13 (TGTAAAACGACGGCCAGTAGCCAGCTGCGATAAGTAGTG) LCO1490-JJ (CHACWAAYCATAAAGATATYGG) Primers Reverse: 28S-Rab_M13 (CAGGAAACAGCTATGACTCGCTACGAGCTTCCACCAGTGTTT) HCO2198_M13 (AWACTTCVGGRTGVCCAARAATCA) R28S1_M13 (CAGGAAACAGCTATGACGCTGCAATCCCAAACAACCC)
Sequence Run Site: Deutsches Zentrum fuer Marine Biodiversitaetsforschung
AAAAAGTACGCGAAACCGTTAAAAGGGAAACGAATGGACTCAGCAATGCGCCCTCTGAGATTCAGCCGGTGGGTGGGATCGGCCGGGGGTTTGCGGATCCGAACGGACCGCGGTCTCCGGCTCGTTCCTCCCCGCCGTCGCACTTCTCTTGGGCGCGCGTCAACGTCGGTTGGGACCGGGTCTTAAAGTTGCCGGGAAGGTAGGTATGGACCTTCGGGTTCGTTCTATTAGAGCCCGGCCTCTCATGGCTCGAGCCCGACCGAGGAGTCGCAGCGCATGCCTCTTGTGGCTAGGGTCCCGTCCTTCCGGCCGGTTGTCGAATGCGGTGGACTGCTTGCAGTGCTCCGCGACTGCTGCCGGTCGTTGGGGTGGTGATCTCGTACCATGCGCTTGGGATGTTGGCGGTCATATGGGTCCATCCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCTTAGGGTGATTGAAACCCCGAGGCGCAATGAAAGTGAAGGCGGCTCCGGCCGCTGAGGTGAGATCCGGCAGGCTTCGGCCTGCCGGCGCATCATCGACCGACCTATTCTACTCTTAGGAAGGTTTGAGTAAGAGCGTGTCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG
Locus: 28S
Nucleotides: 660 bp
Sequence Upload Date: 2021-12-22

Sequence: CYTB

Sequence ID: PGCNA011-21.CYTB GenBank Accession:
Primers Forward: 28S-Far_M13 (TGTAAAACGACGGCCAGTCACGAGACCGATAGCGAACAAGTA) ITSc2-5_M13 (TGTAAAACGACGGCCAGTAGCCAGCTGCGATAAGTAGTG) LCO1490-JJ (CHACWAAYCATAAAGATATYGG) Primers Reverse: 28S-Rab_M13 (CAGGAAACAGCTATGACTCGCTACGAGCTTCCACCAGTGTTT) HCO2198_M13 (AWACTTCVGGRTGVCCAARAATCA) R28S1_M13 (CAGGAAACAGCTATGACGCTGCAATCCCAAACAACCC)
Sequence Run Site: Deutsches Zentrum fuer Marine Biodiversitaetsforschung
CCCCCCCCCTGAAGGCTCAAAAAAAGTGGTGTTAAAATTACGATCTGTTAAAAGCATTGTAATAGCACCGGCTAAAACAGGTAAAGATAAAAGCAATAAAAAAGCAGTGATTAAAATAGACCAAACAAACAAAGGCATTTTATTAAACGTAATACCCGGGGCCCGCATATTAAAAATTGTAGTAATAAAGTTTATTGCCCCTAAAATAGAAGAACCCACCAAATGGAGACTAAAAATCGCCATGTCAACAGAACCCCCGGAGTGTGCTTGGACACTGGACAACGGGGGAAAAACCGTCCACCCTGTTCCTGCTCCTTGTTCTACAAAAACCGAACCCAATAATAAAAACAATGCCGGCGGCAACAACCAAAAACTAATATTGTTTAATCGGGGGAAAGCCATATCAGGGGCTCCAATATATAGTGGAACCAACCAATTACCAAACCCACCAATCATAACGGGCATAACTAAAAAAAAAATCATAATAAAAGCATGTGCTGTTACAATGACATTAAAAAGATGATCGTCCCCCAGCATCGCCCCCGGCGCAAAAAGCTCCAGTCGTATAAGCATACTAAAAGCCGTTCCAATTAAACCCGCCCCAACC
Locus: CYTB
Nucleotides: 607 bp
Sequence Upload Date: 2022-01-14

Sequence: ITS2

Sequence ID: PGCNA011-21.ITS2 GenBank Accession:
Primers Forward: 28S-Far_M13 (TGTAAAACGACGGCCAGTCACGAGACCGATAGCGAACAAGTA) ITSc2-5_M13 (TGTAAAACGACGGCCAGTAGCCAGCTGCGATAAGTAGTG) LCO1490-JJ (CHACWAAYCATAAAGATATYGG) Primers Reverse: 28S-Rab_M13 (CAGGAAACAGCTATGACTCGCTACGAGCTTCCACCAGTGTTT) HCO2198_M13 (AWACTTCVGGRTGVCCAARAATCA) R28S1_M13 (CAGGAAACAGCTATGACGCTGCAATCCCAAACAACCC)
Sequence Run Site: Deutsches Zentrum fuer Marine Biodiversitaetsforschung
TAGACGCTGCAATCCCAAACAACCCGACTCTTCGAAAGCACATCGTCGGCGGCCGGCCGCGCCACAGACGGGGTTGTCACCCTCTGCGACGTGCTGTTCCAAGCAACTTAGGCACGACCGATCCACCTAGAAAGTGCTTCTCGCAACTACAACTCGCCGATGCAGGCATCGGAGATTTCAAATTTGAGCTGGTCCCGCTTCACTCGCCGTTACTGAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATTAATATGCTTAAATTCAGCGGGTAGCCTTGCCTGATCTGAGGTCAAGATAATTAAAGTTCGCCCGACGACGACCGCCGCACGCGGCGACTTCCCGGCACGCGAAGGGCAAAAGACATTTTAGCCTCCGCTGGTGTGCACGGGGAATCTTCCCGCGACGCGGCGAGTCTCTCTGACTTTCAAGGGACACGGTCCGTGCAGTACGGACCGTGACGCCTCAATTCCGCACGCTGGCGTGCGTTGGATGATATCCGACACTCAGACAGACATGCTCCTGGGAGAACCCAAGAGCGCCATTTGCGTTCAAAGATTCGATGATTCACTGAATTCTGCAATTCACACTACTTATCGCAGCTGGCTAC
Locus: ITS2
Nucleotides: 610 bp
Sequence Upload Date: 2021-12-22

Attribution

Specimen Depository: Deutsches Zentrum fuer Marine Biodiversitaetsforschung
Sequencing Center: Deutsches Zentrum fuer Marine Biodiversitaetsforschung
Photography:
Collectors: Severin A. Korfhage & Saskia Brix
Specimen Identification: Steinunn Hilma Olafsdottir

Identifiers

Process ID: PGCNA011-21 Sample ID: cor011
Record Created: 2021-12-13 Museum ID:
Collection Code: DZMB-2-HH975 Field ID: cor011
Deposited In: Deutsches Zentrum fuer Marine Biodiversitaetsforschung
Associated Datasets: DS-PGCNA | Nuclear and mitochondrial DNA sequences of Icelanddic Hexacorallia and Octocorallia
Specimen Linkout:
Checksum: f11742d7918436b5652cf2541562e4c4

Taxonomy

Kingdom: Animalia Subfamily:
Phylum: Cnidaria Tribe:
Class: Anthozoa Genus: Desmophyllum
Order: Scleractinia Species: Desmophyllum pertusum
Family: Caryophylliidae Scientific Name Authorship:
BIN ID: Subspecies:
Identification Method: Image based
Taxonomy Notes: Additional Identifiers: Severin A. Korfhage and Andre Freiwald
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage: adult
Detailed Notes:

Collection

Country/Ocean: Atlantic Ocean () Collection Date Start: 2020-07-08
Province/State: Collection Date End:
Region/County: Icelandic waters Coord. Source:
Sector: North Atlantic Ocean Coord. Accuracy:
Exact Site: Elevation:
Habitat: Elevation Accuracy:
Latitude: 63.854 Depth: 666.6
Longitude: -13.749 Depth Accuracy:
Sampling Protocol:
Collectors: Severin A. Korfhage & Saskia Brix
Collection Note:

Ecology

Realm:
Biome:
Ecoregion:

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/PGCNA011-21
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APGCNA011-21&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APGCNA011-21&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQpwd_ZzNDA01DUytM7JzM0sSU0BAMUwCy8=?length=3

AJAX URLs


                

            

        

    






    


    

        

            

                
© 2024 BOLDSYSTEMS