Sequence: COI-5P
| Sequence ID: | PHANT701-08.COI-5P | GenBank Accession: | |
|---|---|---|---|
| Primers Forward: | VF1_t1 (TGTAAAACGACGGCCAGTTCTCAACCAACCACAAAGACATTGG, VF1d_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCACAARGAYATYGG, LepF1_t1:TGTAAAACGACGGCCAGTATTCAACCAATCATAAAGATATTGG, VF1i_t1:TGTAAAACGACGGCCAGTTCTCAACCAACCAIAAIGAIATIGG) VF2_t1 (TGTAAAACGACGGCCAGTCAACCAACCACAAAGACATTGGCAC, FishF2_t1:TGTAAAACGACGGCCAGTCGACTAATCATAAAGATATCGGCAC) | Primers Reverse: | FishR2_t1 (CAGGAAACAGCTATGACACTTCAGGGTGACCGAAGAATCAGAA, FR1d_t1:CAGGAAACAGCTATGACACCTCAGGGTGTCCGAARAAYCARAA) VR1_t1 (CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCAAAGAATCA, VR1d_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGGCCRAARAAYCA, LepR1_t1:CAGGAAACAGCTATGACTAAACTTCTGGATGTCCAAAAAATCA, VR1i_t1:CAGGAAACAGCTATGACTAGACTTCTGGGTGICCIAAIAAICA) |
| Sequence Run Site: | Centre for Biodiversity Genomics | ||
| CCTATATCTAATCTTTGGTGCCTGAGCAGGGATGGTGGGCACCGCCCTAAGCCTACTCATCCGAATAGAGCTCGGCCAGCCAGGCACGCTCTTGGGAGACGATCAAATCTACAATGTAATTGTAACCGCCCATGCTTTCGTAATAATCTTTTTCATAGTTATACCAATCATAATCGGGGGGTTCGGAAACTGACTAGTCCCTCTAATGATCGGCGCTCCTGACATGGCCTTCCCACGAATAAATAACATAAGCTTTTGACTCTTACCTCCGGCCCTCTTGCTTCTATTAGCCTCTGCGGGGGTAGAAGCGGGGGCCGGAACCGGCTGAACAGTTTATCCCCCCCTTGCAGGCAATCTGGCCCACGCCGGGGCATCCGTGGATTTGGCTATCTTCTCCCTCCACTTAGCCGGAATTTCCTCAATCCTGTCCGCTGTAAATTTTATTACAACTATTATTAATATAAAACCACCAGCCATTTCTCAGTATCAAACACCACTCTTTGTTTGATCTATTCTCGTAACCATAGTCCTTCTCCTACTAGCCCTACCTGTTCTTGCAGCCGCAATCACAATACTGCTAACCGACCGCAACCTAAACACAACATTCTTTGATCCAGCCTGGGG | |||
| Locus: | COI-5P | ||
| Nucleotides: | 624 bp | ||
| Sequence Upload Date: | 2009-03-16 | ||
Attribution
| Specimen Depository: | Florida State University |
|---|---|
| Sequencing Center: | Centre for Biodiversity Genomics |
| Photography: | |
| Collectors: | Eric Johnson |
| Specimen Identification: |
Identifiers
| Process ID: | PHANT701-08 | Sample ID: | GN1549 | |||
|---|---|---|---|---|---|---|
| Record Created: | Museum ID: | |||||
| Collection Code: | Field ID: | GN1549 | ||||
| Deposited In: | Florida State University | |||||
| Associated Datasets: |
DS-CCDBPUB0 | Public release of pre-2010 data produced by the CCDB DS-IUCNPUB | IUCN Red List Public DNA barcode reference library 2024 |
|||||
| Specimen Linkout: | ||||||
| Checksum: | 2fd69012af0cbef3d0010124374f5352 | |||||
Taxonomy
| Kingdom: | Animalia | Subfamily: | |
|---|---|---|---|
| Phylum: | Chordata | Tribe: | |
| Class: | Actinopterygii | Genus: | Echinorhinus |
| Order: | Echinorhiniformes | Species: | Echinorhinus brucus |
| Family: | Echinorhinidae | Scientific Name Authorship: | Bonnaterre, 1788 |
| BIN ID: | BOLD:AAX9837 | Subspecies: | |
| Identification Method: | |||
| Taxonomy Notes: | |||
| * Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings | |||
Specimen
| Voucher Status: | Reproduction: | ||
|---|---|---|---|
| Tissue Descriptor: | Sex: | F | |
| Brief Note: | Life Stage: | ||
| Detailed Notes: | |||
Collection
| Country/Ocean: | United States (US) | Collection Date Start: | |
|---|---|---|---|
| Province/State: | North Carolina | Collection Date End: | |
| Region/County: | Cape Hatteras | Coord. Source: | |
| Sector: | Coord. Accuracy: | ||
| Exact Site: | Elevation: | ||
| Habitat: | Elevation Accuracy: | ||
| Latitude: | Depth: | ||
| Longitude: | Depth Accuracy: | ||
| Sampling Protocol: | |||
| Collectors: | Eric Johnson | ||
| Collection Note: | |||
Ecology
| Realm: | |
|---|---|
| Biome: | |
| Ecoregion: |
Publications
Electropherogram Trace Files
Under development - available shortly
Controller URLs
http://portal.boldsystems.org/record/PHANT701-08 http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APHANT701-08&fields=marker_code http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APHANT701-08&extent=limited http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQrwcPQLMTcw1DWwsM7JzM0sSU0BAMa9C0w=?length=1