Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: PLOMA422-22.ITS2 GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) MatK-1RKIM-f (ACCCAGTCCATCTGGAAATCTTGGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Chinese Academy of Sciences, South China Botanical Garden
GGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCCCATCCTTTTGAGGATATGGGACGGAAGCTGGTCTCCCGTTTGTTACCGCATGCGGTTGGCCAAAATCCGAGCAAAGGACGCAAGGAGCGTCCCGACATGCGGTGGTGAATTCAAGCCTCGTCATATCGTCGGTCGCTCCTGTCCGGAAACTCCAGATGACCCAAAGTCCTCAATGCGACCCCAGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAAAATCGGATGTCTTCGGTATTCGAATTGT
Locus: ITS2
Nucleotides: 430 bp
Sequence Upload Date: 2023-01-04

Sequence: matK

Sequence ID: PLOMA422-22.matK GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) MatK-1RKIM-f (ACCCAGTCCATCTGGAAATCTTGGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Chinese Academy of Sciences, South China Botanical Garden
ACGTTACCGGGTAAAAGATGCCTCTTCTTTGCATTTTTTTCGGTTCTGTCTATACGAGTATTGCAATTGGAAGAATTTTTATAGTAAAAAAAAATCAATTTTGAATCCAAGATTTTTATTGTTCTTATATAATTCTCATGTATGTGAATACGAATCCATCTTTTTTTTTCTACGCAAGCAGTCTTCTCATTTACGATCGACATCTTATGAAGTCTTTTTTGAGCGAATTTTATTCTATGGAAAAATACAACATTTTTTAAAAGTCTTTATTAATAATTTTCCGGCGATCTTAGGGTTGCTCAAGGATCCTTTCTTACATTATGTTAGATATCACGGAAAATGCATTCTGGCAACAAAGGATACGCCGCTTCTTATGAATAAATGGAAATATTATTTTGTTAATTTATGGCAATGTTATTTTTCCGTATGGTTTCAATCACAAAAGATAAATATAAATAAATTATCTAAAGATAATTTAGAGTTTCTGGGTTATCTGTCAAGTTTGCGGCTAAATCCTTTAGTGGTACGTAGTCAAATGCTAGAAAACTCATTTCTAATAGATAATGTTAGAATCAAATTGGATAGCAAAATTCCAATTTCTTCTATTATTGGGTCGTTGGCTAAAGATAAATTTTGTAATGTATTAGGGCATCCTATTAGTAAAGCAACCTGGACGGATTCATCAGATTCTGATATTCTCAACCGATTTGTGCGTATATGCAGAAATATTTCTCATTATTACAGCGGATCTTCAAAAAAAAAGAATTTGTATCGAATAAAATATATACTTCGTCTTT
Locus: matK
Nucleotides: 797 bp
Sequence Upload Date: 2023-01-04

Sequence: rbcL

Sequence ID: PLOMA422-22.rbcL GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) MatK-1RKIM-f (ACCCAGTCCATCTGGAAATCTTGGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Chinese Academy of Sciences, South China Botanical Garden
AGTATAAATTGACTTATTATACTCCTGAATATGAAACCAAGGATACTGATATCTTAGCAGCATTCCGAGTAACTCCTCAACCCGGAGTTCCACCTGAAGAAGCAGGGGCTGCAGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTATGGACCGATGGGCTTACCAGCCTTGATCGTTACAAAGGACGATGCTACCACATCGAGCCCGTTCCAGGAGAAGAAACTCAATTTATTGCGTATGTAGCTTACCCCTTAGACCTTTTTGAAGAAGGGTCGGTTACTAACATGTTTACCTCGATTGTAGGTAATGTATTTGGGTTCAAAGCCCTGGCTGCTCTACGTCTAGAGGATCTGCGAATCCCTCCTGCTTATACTAAAACTTTCCAGGGACCACCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGACGTCCCCTATTAGGATGTACTATTAAACCTAAATTGGGGTTATCCGCGAAGAACTATGGTAGAGCAGTTTATGAATGTCTACGCGGT
Locus: rbcL
Nucleotides: 530 bp
Sequence Upload Date: 2023-01-04

Attribution

Specimen Depository: Herbarium of South China Botanical Garden
Sequencing Center: Chinese Academy of Sciences, South China Botanical Garden
Photography: Jianrong Li
Collectors: Ge Xuejun, Deng Yunfei, Yan Haifei (IBSC), Huber Tridad, Sebastian Riva Regalado, Amalia Delgado, Saen Grillo Yara (USM)
Specimen Identification: Huber Tridad

Identifiers

Process ID: PLOMA422-22 Sample ID: Peru170420
Record Created: 2022-07-27 Museum ID: 0884890
Collection Code: Field ID: 170420
Deposited In: Herbarium of South China Botanical Garden
Associated Datasets:
Specimen Linkout:
Checksum: 0a5c087fa069ddb468dd2dfd09be99c5

Taxonomy

Kingdom: Plantae Subfamily: Brassicoideae
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Sisymbrium
Order: Brassicales Species: Sisymbrium irio
Family: Brassicaceae Scientific Name Authorship: L.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes: Ge Xuejun, Deng Yunfei, Yan Haifei, Lin Zheli (IBSC), Huber Tridad, Amalia Delgado & Johanny Molina (USM)
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Peru (PE) Collection Date Start: 2017-10-07
Province/State: Collection Date End:
Region/County: Caraveli Coord. Source:
Sector: Atico Coord. Accuracy:
Exact Site: roadside of the road Lima to Arequipa, 11 km S of Atico Elevation: 250
Habitat: Elevation Accuracy:
Latitude: -15.806 Depth:
Longitude: -74.4 Depth Accuracy:
Sampling Protocol:
Collectors: Ge Xuejun, Deng Yunfei, Yan Haifei (IBSC), Huber Tridad, Sebastian Riva Regalado, Amalia Delgado, Saen Grillo Yara (USM)
Collection Note:

Ecology

Realm: Neotropic
Biome:
Ecoregion: Sechura_desert

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/PLOMA422-22
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APLOMA422-22&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APLOMA422-22&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQrw8fd1NDEy0jUyss7JzM0sSU0BAMagC0Y=?length=3

AJAX URLs


                

            

        

    






    


    

        

            

                
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