Collection Site(s)



Legend
1+
10+
100+
1000+
10000+

Sequence: ITS1

Sequence ID: PNOR1687-18.ITS1 GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
tcgatgcctaaaacaaaacgacccgagaacactcgatcatcactctcggtgggacggtttcttagctgatcctgttccaccgattccgttgctttaagtatggtcccaatctcggttggatcatgcatttagcttctggatatcacaaaaccccggcacgaaaagtgtcaaggaatatgcaacaaaaacagtctgtgttcgcctacccggagacggtgtgtgcgcggatgctgtgctgcaatataaagtctaaaa
Locus: ITS1
Nucleotides: 255 bp
Sequence Upload Date: 2020-03-13

Sequence: ITS2

Sequence ID: PNOR1687-18.ITS2 GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
atcgtcgtcccccctaatcctctcgaggatacgggacggaagctggtctcccgtgtgttaccgcatgcggttgtccaaaatccgagcaaaggacgcaaagagcgtcccgacatgcggtggtgaatacaaacttcgtcatattgtcggtcgctcttgtccggaagctcttagatgacccaaagttctca
Locus: ITS2
Nucleotides: 188 bp
Sequence Upload Date: 2020-03-13

Sequence: matK

Sequence ID: PNOR1687-18.matK GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
atgtgtcatttcagaactcaagaaaataaagactttacttttagttcaaatcgaatttcaatccaaatggagaaatttcaaggatatttagagttcgatggggctcggcaacagagttttctatatccacttttttttcgggagtatatttatgtacttgcttatgatcacggtttaaatagattaaatagaaatcgctctattttcttggaaaatgcggattatgacaaaaaatatagttcactaattgtgaaacgcttaattttgcgaatgtacaaacagaatcgtttgattattcccactaaggatttgaacaaaaatcttgggcataccaatcttttctattatcaaatgatatctgttttatttgcagtgattgtagaaattccattttccctacgattaggatcctctttcgaaggaaaaaaattaaaaaaatcttataatttacaatcaattcattcaatatttccctttttagaagacaaattctcatattttaattatgtgttagatgtactaataccttaccctattcatctagaaatcttggttcaaaccctacgttaccgggtaaaagatgcctcttctttgcatttttttcggttctgtctatacgagtattgcaattggaagaatttttctagtaaaaaaaaatcaatttttaatccaagatttttattgttcttatataattctcatgtatgtgaatacgaatccatctttttttttctacgcaagcggtcttctcatttaagatcgacatcttatgaagtcttttttgagcgaattttattctatggaaaaatacaacattttttaaaagtctttattaataattttccggcgatcttagggttgctcaaggatcctttcttacattatgttagatatcacggaaaatgcattctggcaacaaaggatacgccgcttctgatgaataaatggaaatattattttgttaatttatggcaatgttatttttccgtatggtttcaatcacaaaaggtcaatataaatcaattatctaaagataatttagagtttctgggttatctgtcaagtttgcggctaaatcctttagtggtacgtagtcaaatgctagaaaactcatttctaatagataatgttagaatcaaattggatagcaaaattccaatttcttctattattgggtcgttggctaaagataaattttgtaatgtattagggcatcctattagtaaagcgacctggacggattcatcagattctgatattctcaaccgatttgtgcgtatatgcagaaatatttctcattattacagcggatcttcaaaaaaaaagaatttgtatcgaataaaatatatacttcgtctttgttgtgttaaaactttggctcgtaaacacaaaagtactgtacgcgcttttttaaaaaggttgggctcgggtttattggaagaattccttacgggggaagaccaagttctttctttaatcttcccaagaagtgattatgcttctaaaagattatatcgagtgcgggtttggtatttggatattctttatcttaatgatttggtcaatcatgaataa
Locus: matK
Nucleotides: 1575 bp
Sequence Upload Date: 2020-03-13

Sequence: rbcLa

Sequence ID: PNOR1687-18.rbcLa GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgttaaagagtataaattgacttattatactcctgaatatgaaaccaaggatactgatatcttggcagcattccgagtaactcctcaacccggagttccacctgaagaagcaggggctgcagtagctgctgaatcttctactggtacatggacaactgtgtggaccgatgggcttaccagccttgatcgttacaaaggacgatgctaccacatcgagcccgttccaggagaagaaactcaatttattgcgtatgtagcttaccccttagacctttttgaagaagggtcggttactaacatgtttacctcgattgtaggtaatgtatttgggttcaaagccctggctgctctacgtctagaggatctgcgaatccctcctgcttatactaaaactttccagggaccacctcatggtatccaagttgaaagagataaattgaacaagtatggacgtcccctattaggatgtactattaaacctaaattggggttatccgcgaagaactatggtagagcagtttatgaatgtctacgtggtggacttgattttaccaaagatgatgagaatgtgaactcccaaccatttatgcgttggagagaccgtttcttattttgtgccgaagctatttataaatcacaggctgaaacaggtgaaatcaaagggcattatttgaatgctactgcgggtacatgcgaagaaatgatcaaaagagctgtatttgccagagaattgggagttcctatcgtaatgcatgactacttaacagggggattcaccgcaaatactagtttggctcattattgccgagataatggtctacttcttcacatccaccgtgcaatgcacgctgttattgatagacagaagaatcatggtatgcacttccgtgtactagctaaagctttacgtctatctggtggagatcatgttcacgcgggtacagtagtaggtaaacttgaaggagacagagagtcaactttgggttttgttgatttactgcgcgatgattatgttgaaaaagaccgaagccgtggtatctttttcactcaagattgggtctcactaccaggtgttctacctgtggcttctgggggtattcacgtttggcatatgcctgctttgaccgagatctttggagatgattccgtactacaattcggtggcggaactttaggccacccttggggaaatgcaccgggtgccgtagctaaccgagtagctctggaagcatgtgtacaagctcgtaatgagggacgtgatcttgcagtcgagggtaatgaaattgtccgtgaggcttgcaaatggagtcctgaactagctgctgcttgtgaagtatggaaggagatcagatttaacttcccaaccgttgatacattagatgaacaaaagtag
Locus: rbcLa
Nucleotides: 1440 bp
Sequence Upload Date: 2020-03-13

Attribution

Specimen Depository: Tromso University Museum
Sequencing Center: Genoscope, Centre National de Sequencage
Photography:
Collectors: Jette Svendsen,
Specimen Identification: Thomas Karlsson

Identifiers

Process ID: PNOR1687-18 Sample ID: TROM_V_170159_sg
Record Created: 2018-11-13 Museum ID: TROM_V_170159_sg
Collection Code: Field ID:
Deposited In: Tromso University Museum
Associated Datasets:
Specimen Linkout:
Checksum: b04c168e92fc0c29df23abd8ad8d0e8f

Taxonomy

Kingdom: Plantae Subfamily: Brassicoideae
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Sisymbrium
Order: Brassicales Species: Sisymbrium officinale
Family: Brassicaceae Scientific Name Authorship: (L.) Scop.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Denmark (DK) Collection Date Start: 1970-07-31
Province/State: Collection Date End:
Region/County: Coord. Source: Coordinates from country centroid
Sector: Coord. Accuracy:
Exact Site: Zealand: Dyrehaven, Copenhagen. Roadside: Elevation:
Habitat: Elevation Accuracy:
Latitude: 56.001186 Depth:
Longitude: 9.378671 Depth Accuracy:
Sampling Protocol:
Collectors: Jette Svendsen,
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Baltic_mixed_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/PNOR1687-18
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APNOR1687-18&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APNOR1687-18&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQrw8w8yNLMw1zW0sM7JzM0sSU0BAMb2C08=?length=4

AJAX URLs


                

            

        

    






    


    

        

            

                
© 2024 BOLDSYSTEMS