Specimen Images



Collection Site(s)



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Sequence: ITS1

Sequence ID: PNOR421-16.ITS1 GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
tcgtgaccctgaccaaaacagaccgtgaacgcgtcatcttgcctgccagcggcggccctgccgtcgcttggccaaactcctcgataacctcctctccttggagcgggggctcggggtaaaagaacccacggcgccgaaggcgtcaaggaacactgtgcctaacccggggaagcggctggcttgctagctgcccctcgtgttgcaatgctatttaatccaca
Locus: ITS1
Nucleotides: 221 bp
Sequence Upload Date: 2020-03-13

Sequence: ITS2

Sequence ID: PNOR421-16.ITS2 GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
caaacacgctcccacccctcatcgggttgtgggatgcggcatgtggctccccgtcttgcaaggggcggtgggccgaagatgcggctgccggcgtatcgtgccggacacagcgcgtggtgggcgacctcgctttacttaccgcagtgcatccggcccatagccgacgtgatggccttaaggaccctatgaacggagcgcatgacgctccga
Locus: ITS2
Nucleotides: 210 bp
Sequence Upload Date: 2020-03-13

Sequence: matK

Sequence ID: PNOR421-16.matK GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
atggaaaaattcgaagggtattcagaaaaacacaaatctcgtcaacaatactttgtctacccactactctttcaggagtatatttatgcatttgcccatgattatggattaaatgattccgaacctgtggaaattgttagttgtaataacaagaaatttagttcactacttgtgaaacgtttaattattcgaatgtatcagcagaattttgggattaacttggttaatcatcctaaccaagatcgattgttggattacaaaattggtttttattctgagttttattctcagattctatctgagggatttgcaatcgttgtagaaatcccattctcgctacgagaattaccttgtcccaaagaaaaagaaatacccaagtttcagaatttacgctctattcattcaatatttccctttttagaagacacatttttgcatttggattatttatcacatatagaaataccctatcctatccatttggaaatcttggttcaactccttcaataccgtatccaagatgttccatctttgcatttattgcgattctttctcaactactattcaaattggaatagttttattacttcaatgaaatctatttttattttaaaaaaagaaaataaaagactatttcgattcctatataactcttatctatcagaatatgaatttttcttgttgtttcttcgtaaacaatcttcttgcttaccattagcatcttctggaacttttttggaacgaatccacttttcgaggaagatggaacattttgggataatgtacccaggtttttttaggaaaaccatatggttttttatggatcctcttatgcattatgttcgatatcaaggaaaggcaatttttgcatcaaaaggaactctttttttcaacaaaaaatggaaatggtaccttatccatttgtggcaatattttttctctttttggactcagccgcgaaggatccatctaaaccaattagcaaactcttgcttcgattttatggggtatctttcaagtgtaccaaaaagtcctttgttagtaaggaatcaaatgctggagaattcatttctaatagatactcgaatgccaaaattcgataccatagttcccgttactgccctcataggatacttatcaaaagctcaattttgtactggatcgggccatcctattagtaaacccatttggacagatttatcagattgggatattcttgatcggtttggtcggatatgtagaaatctttttcattatcatagtggatcttcgaaaaaacggactttgtatcgactaaagtatatacttcgactttcatgcgctagaactttagctcgtaaacataaaagcacggtacgaacttttatgcaacgattaggttcggcatttttagaagaattttttaccgaagaagagctagttttttctttgatgttcaccaaaacaacccttttttctttccgtggatcgcacagtgagcgtatttggtattttgatattatacgtatcaacgacctggtgaagcctcttaattaa
Locus: matK
Nucleotides: 1536 bp
Sequence Upload Date: 2020-03-13

Sequence: rbcLa

Sequence ID: PNOR421-16.rbcLa GenBank Accession:
Primers Forward: Primers Reverse:
Sequence Run Site: Genoscope, Centre National de Sequencage
atgtcaccacaaacagaaactaaagcaagtgttggatttcaagctggtgttaaagattataaattgacttactacaccccggagtatgaaaccaaggatactgatatcttggcagcattccgagtaactcctcagcctggggttcccccggaagaagcaggggctgcagtagctgccgaatcttctactggtacatggacaactgtttggactgatggacttaccagtcttgatcgttacaaaggacgatgctatcacatcgagcctgttgctggggaagacaaccaatggatctgttatgtagcttatccattagacctatttgaagagggttccgttactaacatgtttacttccattgtgggtaacgtatttggtttcaaagccctacgtgctctacgtctggaggatctacgaattcccgttgcttatgcaaaaactttccaaggcccgcctcatggtatccaagttgaaagagataagttgaacaagtatggtcgtcctttattgggatgtactattaaaccaaaattgggattatccgcaaaaaattacggtagagcgtgttatgaatgtctacgtggtggacttgattttaccaaagatgatgaaaacgtaaactcacaaccatttatgcgctggagagaccgttttgtcttttgtgctgaagctatttataaagcacaggctgaaaccggtgaaattaaggggcattacttgaatgcgactgcaggtacatgtgaagaaatgatgaagagagctatatttgcgagagaattaggggttcctattgtaatgcatgactacataactgggggattcaccgcaaatactagtttggctcattattgccgcgacaatggcctacttcttcacattcaccgtgcaatgcatgcagttattgatagacagaaaaatcatggtatgcatttccgtgtattagctaaagcattgcgtatgtctgggggagatcatatccacgccggtacagtagtaggtaagttagaaggggaacgcgaaatgactttaggttttgttgatttattgcgcgatgattttattgaaaaagaccgtgctcgcggtatctttttcactcaggactgggtatccatgccaggtgttataccggtagcttcaggtggtattcatgtttggcatatgccagctctgaccgaaatctttggggatgattccgtattacaatttggtggaggaactttaggacatccttggggaaatgcacctggtgcagcagctaatcgagtggctttagaagcctgtgtacaagctcgtaacgaagggcgcgatcttgctcgtgaaggtaatgaaattatccgagcagcttgcaaatggagtcctgaactagccgcggcttgtgaagtatggaaggcgatcaaattcgagttcgagccggtagatactatcgataagaaggcctaa
Locus: rbcLa
Nucleotides: 1440 bp
Sequence Upload Date: 2020-03-13

Attribution

Specimen Depository: Tromso University Museum
Sequencing Center: Genoscope, Centre National de Sequencage
Photography: Iva Pitelkova
Collectors: Skoglund, Trond
Specimen Identification: Trond Skoglund

Identifiers

Process ID: PNOR421-16 Sample ID: TROM_V_202912_sg
Record Created: 2016-09-07 Museum ID: TROM_V_202912
Collection Code: Field ID:
Deposited In: Tromso University Museum
Associated Datasets:
Specimen Linkout:
Checksum: b6b4080fea9d0d2bc558cff1c2c0a2cf

Taxonomy

Kingdom: Plantae Subfamily: Pooideae
Phylum: Tracheophyta Tribe:
Class: Liliopsida Genus: Poa
Order: Poales Species: Poa pratensis
Family: Poaceae Scientific Name Authorship: L.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes: Epilobium roseum Schreb.
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Norway (NO) Collection Date Start: 2010-06-24
Province/State: Nordland Collection Date End:
Region/County: Meloy Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Bjaerangsfjorden: Kjelddal. Elevation: 25
Habitat: Elevation Accuracy:
Latitude: 66.7702 Depth:
Longitude: 13.6676 Depth Accuracy:
Sampling Protocol:
Collectors: Skoglund, Trond
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Scandinavian_Montane_Birch_forest_and_grasslands

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/PNOR421-16
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APNOR421-16&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APNOR421-16&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQrw8w8yMTLUNTSzzsnMzSxJTQEAvJMLDg==?length=4

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