Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: POWNA1917-12.ITS2 GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK2.1a (ATCCATCTGGAAATCTTAGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
TGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCA--TTA-GGTCGAGGGCACGCC-TGCCT---GGGCGTCACGCATCGC----GTCTCCCCC----CA-----CC---AC-CCCG------CGTGGATGGGG-----------------AGGAGGATGA---TGGCCT--CCCATGCCTCACCG-------------------GGCGTGGATGGCCTAAAT---AAGGAGCC-CCCGGTTACGAAGTGCCGCGGCGATTG---GTGGAATACAAGGCC--TAG-CCTAGGACGAAA-TCG--------AAGTCG--------CGCAC-ATC------------GTAGCTCTTGAGGACTCGCAGGACCCTAA-CTTG---------TTTGCCCCTA----GGGGCGGCA------AAACCGTTGCGA-CCCCAGGTCAGGCGGGGCT-ACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAA-GAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACC-GGGAACA--GCCCAGCTT-TAGAATCGGGCGGCTTC---GCCGTCCGA
Locus: ITS2
Nucleotides: 595 bp
Sequence Upload Date: 2020-05-13

Sequence: matK

Sequence ID: POWNA1917-12.matK GenBank Accession: JN894951
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK2.1a (ATCCATCTGGAAATCTTAGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
TGCTTCTTCTTTGCATTTAGTAAGATTTTTTCTTTATGAGTCTCGTAATTTAAATAGTCTTATTACTCCAAAGGAATTCATTTCCTTTTTGAAAAAAAGAAATCAAAGATTATTCTTGTTCCTATATAATTTCCATGTATGCGAATACGAATCCTTTTTTGTTTTTCTCCGTAACCAATCTTCTTATTTACGACCAACTTCTTTTGGAAACCTTATTGAACGAATTCATTTCTACGGAAAACGAAAATATCTAGTAAAAGTTTTTACTAAAGATTTTGGGGTTATCCTATGGCTTTTCAGAGAACCTTTCCCGCATTATGTTAGGTATCAAGGAAAATCAATTCTAGTCTCAAAAGGGACATCTCTTTTGATGCAGAAATGGAAAAATTACCTTATCCGTTTCGGGCAATGTAATTTTTCTGTCTGGTCTCAACCAAAAAGACTCTATATCAATCGATTAGCAAACCATTCCTTAGACTTTATGGGTTTTCGTTCAAATGTGCGACTCAATTCTTCAGTAATACGGAGTCAAATGTTACAAAATGCATTTCTAATAGAAAATATTATTAAGAAGTTTGATACCATAGTTCCAATTATTCCTTTGGTTGGATCGTTGGCTCAAGCGAGATTTTGTAATGGATTAGGGCATCCCATTAGTAAGTCGGTATGGACCGATTTATCCGATTCTGATATTATCGATCGATTTGGGCGTATATGTAGAAATCTTTTTCATTATTATAGCGGCTCTTCAAGAAAAAAAAGTTTGTATCGAATAAAGTATATACTTCGACTTTCTTGTGCTAGAACTTTGT
Locus: matK
Nucleotides: 812 bp
Sequence Upload Date: 2014-05-26

Sequence: rbcL

Sequence ID: POWNA1917-12.rbcL GenBank Accession: JN892034
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK2.1a (ATCCATCTGGAAATCTTAGTTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
AAGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAAATTGACTTATTATACTCCTGAGTATGAAACCCTAGATACTGATATCTTGGCAGCATTCCGAGTAAGTCCTCAACCGGGAGTTCCACCCGAAGAAGCAGGGGCTGCAGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTATGGACCGACGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTACCACATCGAGCCTGTTGCTGGAGAAGAAAATCAATATATTTGTTATGTAGCATATCCCTTAGACCTTTTTGAAGAAGGTTCTGTTACTAATATGTTTACTTCCATTGTGGGTAACGTATTTGGGTTCAAAGCCCTGCGTGCTCTACGTTTGGAGGATTTGCGAATCCCTGTTGCTTATATAAAAACTTTCCAAGGCCCGCCTCACGGTATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGCCGCCCCCTATTGGGATGCACTATTAAACCAAAATTGGGGTTATCCGCTAAAAACTATGGTCGAGCAGTTT
Locus: rbcL
Nucleotides: 542 bp
Sequence Upload Date: 2014-05-26

Attribution

Specimen Depository: National Museum Wales
Sequencing Center: National Botanic Garden of Wales
Photography:
Collectors: Hutchinson G,
Specimen Identification: Tim C. G. Rich

Identifiers

Process ID: POWNA1917-12 Sample ID: NMW2857
Record Created: 2012-01-24 Museum ID: V.2007.002.237
Collection Code: NMW2857 Field ID: NMW2857
Deposited In: National Museum Wales
Associated Datasets: DS-DBNFPCW | DNA Barcoding the Native Flowering Plants and Conifers of Wales
DS-UKBOL | UK Barcode of Life
Specimen Linkout:
Checksum: 67d321f1c1ccb893dac5dd853eeecaf5

Taxonomy

Kingdom: Plantae Subfamily: Chenopodioideae
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Atriplex
Order: Caryophyllales Species: Atriplex littoralis
Family: Amaranthaceae Scientific Name Authorship: L.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2007-08-25
Province/State: Wales Collection Date End:
Region/County: Glamorgan Coord. Source:
Sector: Cardiff Barrage Coord. Accuracy:
Exact Site: Elevation:
Habitat: Elevation Accuracy:
Latitude: 51.452923 Depth:
Longitude: -3.161349 Depth Accuracy:
Sampling Protocol:
Collectors: Hutchinson G,
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion:

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/POWNA1917-12
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APOWNA1917-12&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APOWNA1917-12&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQrwD_dzNLQ0NNc1NLLOyczNLElNAQDRvguL?length=3

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