Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: POWNA2986-12.ITS2 GenBank Accession:
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK_1R_kim (ACCCAGTCCATCTGGAAATCTTGGTCC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
TGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCA---TCCGGCCGAGGGCACGCC-TGCCT---GGGCGTCAC---GCATC-TCGTCGC-CCCCTG-------CCACACATCCTAAAGG----------TGTAATAATG----GTCAT-GGGGGCGG--AAATTGGCCTC-CC---GTTCTT--------------------GTG-TTTGGTTGGCCTAAAGAT---GAGTCCCC-TTAGGGCGG---ATG--CACAA-CTA--GTGGTGG------TTGA--ATA---GACCCTC-GT------------CTTG-TGTTGTGTGTCGTG---------AGC-TGTGA-GGGAAA-TTCTCAATTTAGACCCCAC-TGTATCGT------------TAAAAAACGAT------AT--ATCGACCGCGA-CCCCAGGTCAGGCGGGACT-ACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAA-GAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACC-GGGATCA--GCCCAGCTT-GAAAATCGGGCGGCCTT---GCTGTCCGA
Locus: ITS2
Nucleotides: 595 bp
Sequence Upload Date: 2020-05-13

Sequence: matK

Sequence ID: POWNA2986-12.matK GenBank Accession: JN894980
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK_1R_kim (ACCCAGTCCATCTGGAAATCTTGGTCC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
GATTCTTTCTCCATGAGTGTCATAATTGGGATAGTCTTATTACTTCAAATTCAAAGAAAGGCAGTTCTTCTTTTTCAAAAAGAAATCACAGACTATTCTTCTTCCTATATACTTCTCATGTATGTGAATATGAATCAGGCTTCCTCTTTCTCCGTAACCAATCTTCTCACTTACGATCAACATCTTCTGGAGCTCTTATTGAACGAATATATTTCTATGGAAAAATAGAACATCTTGCAGAAGTCTTTGCCAGGGCTTTTCAAGCGAATTTATGGTTGTTCAAAGATCCTTTCATGCATTATGTTAGGTATCAAGGAAAATCAATTCTTGCTTCAAAAGGGACGTTTCTTTTGATGAATAAATGGAAATATTATTTTGTCAATTTCTGGAAATCTTATTTTTACCTGTGGTCTCAACCAGGAAAGATTTATATAAACCAATTATCCAATCATTCCCTTGACTTTCTGGGTTATCGTTCAAGTGTGCGGCTAAAGTCTTCCATGGTACGCAGTCAAATGCTAGAAAATGCATTTCTAATTGAAAATGCTATTAAGAAGTTTGAGACTATTGTTCCAATTATGCCTCTCATTGGATCATTGGCTAAATCTAAATTTTGTAACGCATCGGGGCATCCTATTGGTAAGGTGATTTGGGCCGATTTATCAGATTCTGATATTATTGACCGCTTTGGGCGTATATACAGAAATCTTTCTCATTATCATAGTGGATCTTCAAAAAAAAAGAGTTTGTATCGAGTAAAGTATA
Locus: matK
Nucleotides: 765 bp
Sequence Upload Date: 2014-05-26

Sequence: rbcL

Sequence ID: POWNA2986-12.rbcL GenBank Accession: JN892071
Primers Forward: ITS2F (ATTCCCGGACCACGCCTGGCTGA) matK_1R_kim (ACCCAGTCCATCTGGAAATCTTGGTCC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS_S3R (GACGCTTCTCCAGACTACAAT) MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG) rbcLr590 (AGTCCACCGCGTAGACATTCAT)
Sequence Run Site: National Botanic Garden of Wales
AAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGACTATGAAACCAAGGATACTGATATTTTGGCAGCATTTCGAGTAACTCCTCAACCTGGAGTTCCGCCTGAAGAAGCAGGGGCCGCAGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGACTTACGAGCCTTGATCGTTACAAAGGGCGATGCTATGGAATTGAGCCTGTTCCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTACCCATTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTAGGTAATGTATTTGGGTTCAAAGCCCTGCGTGCTCTACGTCTGGAAGATTTACGAATCCCTACTGCGTATGTTAAAACTTTCCAAGGTCCGCCTCACGGCATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGTCGTCCCCTGTTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAAAACTACGGTAGAGCTGTTT
Locus: rbcL
Nucleotides: 542 bp
Sequence Upload Date: 2014-05-26

Attribution

Specimen Depository: National Museum Wales
Sequencing Center: National Botanic Garden of Wales
Photography: None
Collectors: Rich, T.C.G.,,,
Specimen Identification: Tim C. G. Rich

Identifiers

Process ID: POWNA2986-12 Sample ID: NMW6200
Record Created: 2012-01-24 Museum ID: V.2011.001.147
Collection Code: NMW6200 Field ID: NMW6200
Deposited In: National Museum Wales
Associated Datasets: DS-DBNFPCW | DNA Barcoding the Native Flowering Plants and Conifers of Wales
DS-UKBOL | UK Barcode of Life
Specimen Linkout:
Checksum: d462673c5c5b2a6cc6a010648642c336

Taxonomy

Kingdom: Plantae Subfamily: Cichorioideae
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Sonchus
Order: Asterales Species: Sonchus asper
Family: Asteraceae Scientific Name Authorship: (L.) Hill
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: United Kingdom (GB) Collection Date Start: 2011-05-31
Province/State: Wales Collection Date End:
Region/County: Glamorgan (41) Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Rhiwbina Elevation:
Habitat: Elevation Accuracy:
Latitude: 51.534157 Depth:
Longitude: -3.219645 Depth Accuracy:
Sampling Protocol:
Collectors: Rich, T.C.G.,,,
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Celtic_broadleaf_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/POWNA2986-12
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3APOWNA2986-12&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3APOWNA2986-12&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQrwD_dzNLK0MNM1NLLOyczNLElNAQDSHAuS?length=3

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