Specimen Images



Collection Site(s)



Legend
1+
10+
100+
1000+
10000+

Sequence: matK

Sequence ID: SAFH3971-12.matK GenBank Accession:
Primers Forward: MatK-1RKIM-f (ACCCAGTCCATCTGGAAATCTTGGTTC) Primers Reverse: MatK-3FKIM-r (CGTACAGTACTTTTGTGTTTACGAG)
Sequence Run Site: Centre for Biodiversity Genomics
AAAGATCCTTCCTCTTTGCATTTATTAAGA---TTCTTTCTCCAT---------GAGTGTCATAAT------------------TGGGAT---------------------------AGTCTTATTACTTCAAATTCA---------------AAGAAAGGCAGTTCT---TCTTTTTCAAAA------------------------------AGAAATCACAGACTATTCTTCTTCCTATAT------------ACTTCTCATGTATGTGAATATGAATCAGGCTTC---CTCTTTCTCCGTAACCAATCTTCT---CACTTACGATCAACA---TCTTCTGGAGCTCTTATTGAACGAATATATTTCTATGGA---------------AAAATAGAACATCTT---------------------GCAGAAGTC------------TTTGCCAGG---------------------------GCTTTTCAAGCG------AATTTCTGGTTGTTCAAAGATCCT------TTCATGCATTATGTTAGGTATCAAGGAAAATCAATTCTTGCTTCA------AAAGGGACGTTT------CTTTTGATGAAT---------AAATGGAAATATTATTTTGTCAATTTCTGGAAATCTTATTTTTACCTGTGGTCTCAACCAGGAAAGATTTATATA------AAC---CAATTATCCAATCATTCC------CTTGACTTTCTGGGT------TATCGTTCAAGT------GTGCGGCTAAAGTCTTCCATGGTACGC------AGTCAAATGCTAGAAAATGCA------TTTCTAATTGAAAAT------GCTATTAAGAAGTTTGAGACTATTGTTCCAATTATGCCTCTCATTGGATCATTGGCTAAATCTAAATTTTGTAACGCATCGGGGCATCCTATTGGTAAGGTGATTTGGGCC---GATTTATCAGATTCTGATATTATTGACCGCTTTGGGCGTATATACAGAAATCTTTCTCATTATCAT---AGTGGATCTTCAAAAAAAAAGAGTTTGTATCGAGTAAAGTATATACTTCGACTTTCTTGTGCTA
Locus: matK
Nucleotides: 1099 bp
Sequence Upload Date: 2012-05-25

Attribution

Specimen Depository: South African National Biodiversity Institute, Compton Herbarium
Sequencing Center: Centre for Biodiversity Genomics
Photography: None
Collectors: Dennis Komape, Lerato Mabe, Stefan Siebert
Specimen Identification: Stefan J Siebert

Identifiers

Process ID: SAFH3971-12 Sample ID: KMS-0018
Record Created: 2012-01-30 Museum ID: KMS-0018
Collection Code: NBG Field ID:
Deposited In: South African National Biodiversity Institute, Compton Herbarium
Associated Datasets:
Specimen Linkout:
Checksum: 461cdaaec9ef90d1d2941b2af28ce9da

Taxonomy

Kingdom: Plantae Subfamily: Cichorioideae
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Sonchus
Order: Asterales Species: Sonchus asper
Family: Asteraceae Scientific Name Authorship: (L.) Hill
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: South Africa (ZA) Collection Date Start: 2011-10-06
Province/State: North-West Collection Date End:
Region/County: Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Potchefstroom, Wasgoedspruit, Albert Luthuli Street Elevation: 1302
Habitat: Elevation Accuracy:
Latitude: -26.701 Depth:
Longitude: 27.099 Depth Accuracy:
Sampling Protocol:
Collectors: Dennis Komape, Lerato Mabe, Stefan Siebert
Collection Note:

Ecology

Realm: Afrotropic
Biome:
Ecoregion: Highveld_grasslands

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/SAFH3971-12
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ASAFH3971-12&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ASAFH3971-12&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQp2dPMwtjQ31DU0ss7JzM0sSU0BAMTJCyo=?length=1

AJAX URLs


                

            

        

    






    


    

        

            

                
© 2024 BOLDSYSTEMS