Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: SDH3145-15.ITS2 GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) matK_xF (TAATTTACGATCAATTCATTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) matK-MALPR1 (ACAAGAAAGTCGAAGTAT) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
Locus: ITS2
Nucleotides: bp
Sequence Upload Date: 2015-12-21

Sequence: rbcLa

Sequence ID: SDH3145-15.rbcLa GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) matK_xF (TAATTTACGATCAATTCATTC) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) matK-MALPR1 (ACAAGAAAGTCGAAGTAT) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
AGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAAATTGACTTATTATACTCCTGACTATCAACCCCAGGATACTGATATCTTGGCAGCATTCCGAGTATCTCCCCAACCTGGAGTTCCATCAGAAGAAGCAGGGGCCGCAGTAGCTGCCGAATCTTCGACTGGTACATGGACAACTGTATGGACTGACGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTACCACATCGATCCCGTTCCTGGAGAAGACAATCAATATATTTGTTATGTAGCTTACCCCTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGGTTCAAAGCCCTGCGTGCTCTACGTTTGGAGGATTTACGAATCCCTATTGCTTATGTAAAAACTTTCCAAGGACCGCCTCACGGTATCCAGGTTGAGAGAGATAAATTGAACAAGTATGGTCGCCCCCTATTGGGATGCACTATTAACCCGAAATTGGGGTTATCTGCTAAAAACTATGGTCGAGCAGTTTATGAATGTCTT
Locus: rbcLa
Nucleotides: 552 bp
Sequence Upload Date: 2017-05-24

Attribution

Specimen Depository: San Diego Natural History Museum
Sequencing Center: Centre for Biodiversity Genomics
Photography: SD Herbarium
Collectors: M.R.Mulligan
Specimen Identification:

Identifiers

Process ID: SDH3145-15 Sample ID: CCDB-24804-A10
Record Created: 2015-09-25 Museum ID: SD-190847
Collection Code: SD Herbarium Field ID:
Deposited In: San Diego Natural History Museum
Associated Datasets: DS-SDNHM | San Diego Natural History Museum, Herbarium Barcodes
Specimen Linkout:
Checksum: a2cc8d44228b34b3f5e07c077556c08c

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Tracheophyta Tribe:
Class: Magnoliopsida Genus: Carpobrotus
Order: Caryophyllales Species: Carpobrotus chilensis
Family: Aizoaceae Scientific Name Authorship: (Molina) N.E. Br.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes:
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes: Large clump sprawling. Magenta flower.

Collection

Country/Ocean: United States (US) Collection Date Start: 2007-03-26
Province/State: California Collection Date End:
Region/County: San Diego Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Elevation: 17
Habitat: Perennial native grassland with Erodium spp., Lotus scoparius, Sidalcea malviflora, Atriplex semibaccata and Rhus integrifolia.|Coastal bluff, flat to gently sloping clay and sandy soils.|Phenology=FFL Elevation Accuracy:
Latitude: 33.27392 Depth:
Longitude: -117.44964 Depth Accuracy:
Sampling Protocol:
Collectors: M.R.Mulligan
Collection Note:

Ecology

Realm: Nearctic
Biome:
Ecoregion: California_coastal_sage_and_chaparral

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/SDH3145-15
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ASDH3145-15&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ASDH3145-15&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQp28TA2NDHVNTS1zsnMzSxJTQEAufUK4w==?length=2

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