Specimen Images



Collection Site(s)



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Sequence: rbcLa

Sequence ID: TMBRY271-17.rbcLa GenBank Accession:
Primers Forward: rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: rbcLa-R (GTAAAATCAAGTCCACCRCG) trnFGAAf (ATTTGAACTGGTGACACGAG)
Sequence Run Site: Centre for Biodiversity Genomics
AGGTGTTGGATTCAAAGCTGGTGTTAAAGATCACAGATTAACTTATTACACTCCAGATTATCAGACTAAAGAAACTGATATTTTAGCAGCATTTCGAATGACTCCCCAACCGGGAGTACCAGCTGAAGAGGCGGGAGCAGCAGTAGCTGCGGAATCTTCCACCGGTACGTGGACCACTGTCTGGACCGACGGACTTACTAGTCTTGATCGTTACAAGGGACGGTGCTATGGTATTGAAGCAGTTCCTGGAGAAGATAATCAATATATTGCTTATGTTGCTTACCCATTAGATTTATTTGAAGAAGGTTCTGTTACCAATTTATTTACTTCTATTGTTGGTAATGTCTTTGGATTCAAAGCTCTACGAGCTTTACGTCTAGAAGATTTACGTATTCCTCCAGCTTATTCCAAAACTTTCCAAGGCCCACCTCATGGTATTCAAGTTGAAAGAGATAAATTAAACAAATATGGTCGTCCATTATTAGGATGTACCATTAAGCCAAAATTGGGTTTATCTGCTAAAAACTATGGTAGAGCTGTTTATGAATGCCTT
Locus: rbcLa
Nucleotides: 553 bp
Sequence Upload Date: 2017-11-01

Sequence: trnL-F

Sequence ID: TMBRY271-17.trnL-F GenBank Accession:
Primers Forward: rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) trnLUAAc (CGAAATCGGTAGACGCTACG) Primers Reverse: rbcLa-R (GTAAAATCAAGTCCACCRCG) trnFGAAf (ATTTGAACTGGTGACACGAG)
Sequence Run Site: Centre for Biodiversity Genomics
gacttaaataatttgagcttcagtagaaaaacttactaaatgctagctttcagattcagggaaacttaggttgaaaaaagtataagtaatcctgagccaaattttgtgttatttaagactgaaataggtgcagagactcgatggaagctatcctaacgaataatattctaaattgcatttcgtaattctattaattaataaataaaatggaatttatttaaatttcattttttattgaatattacgcgaggataaagatagagtccaattttacatgttgatctcagcaataatttaaatcgtagtaaaaagaaaatccgttggctttattgaccgtgagggttcaagtccctctacccccaaaactataaatttttattgacataaactttcaatttatgttaggatatgtagatggagagggccggaatagctcagttggtagagcagaggactgaaaatc
Locus: trnL-F
Nucleotides: 463 bp
Sequence Upload Date: 2017-11-01

Attribution

Specimen Depository: Tromso University Museum
Sequencing Center: Centre for Biodiversity Genomics
Photography: Iva Pitelkova
Collectors: Geir Arnesen
Specimen Identification: Geir Arnesen

Identifiers

Process ID: TMBRY271-17 Sample ID: TROM_B_1300061
Record Created: 2017-04-25 Museum ID: TROM_B_1300061
Collection Code: Field ID:
Deposited In: Tromso University Museum
Associated Datasets:
Specimen Linkout:
Checksum: 2e2928d454af1bce7814d17d2c8dc15e

Taxonomy

Kingdom: Plantae Subfamily:
Phylum: Bryophyta Tribe:
Class: Bryopsida Genus: Rhizomnium
Order: Bryales Species: Rhizomnium punctatum
Family: Mniaceae Scientific Name Authorship: T. Koponen, 1968
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes: Rhizomnium punctatum (Hedw.) T.J.Kop.
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Reproduction:
Tissue Descriptor: Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: Norway (NO) Collection Date Start: 2010-06-22
Province/State: Troms Collection Date End:
Region/County: Karlsoy Coord. Source:
Sector: Coord. Accuracy:
Exact Site: Reinoya, Reinskarelva. Elevation:
Habitat: Elevation Accuracy:
Latitude: 69.9272 Depth:
Longitude: 19.6217 Depth Accuracy:
Sampling Protocol:
Collectors: Geir Arnesen
Collection Note:

Ecology

Realm: Palearctic
Biome:
Ecoregion: Scandinavian_Montane_Birch_forest_and_grasslands

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/TMBRY271-17
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3ATMBRY271-17&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3ATMBRY271-17&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQrxdQqKNDI31DU0t87JzM0sSU0BAMgVC2E=?length=2

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