Specimen Images



Collection Site(s)



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Sequence: ITS2

Sequence ID: UMAAI1955-22.ITS2 GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
TGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCTATTTGGCCGAGGGCACGCCTGCCTGGGCGTCATGCCTCACATCGCTCCGTGCCCCCCGCCTCCCACGGCCACAGCATTGGGGAGCGGCGGCGCGGATGCGGAGATTGACCTCCCGTGCCTTGCGGCGCGGCGGGTTGAAATGACGGTCGCTGGCCCGGTCGGACACGGCGAATGGTGGACAAACACAAAGGACGCTGAACGCTGTGTACTCGACCCTAAGCCAAAGCGGCGCGTACAAGGAGCCCATGCCGACGAGCGCTCAAGAGCGCCCTCGGACCACGACCCCAGGTCAGGCGGGGCCACCCGCTGAGTTTAA
Locus: ITS2
Nucleotides: 368 bp
Sequence Upload Date: 2023-08-01

Sequence: rbcLa

Sequence ID: UMAAI1955-22.rbcLa GenBank Accession:
Primers Forward: ITS_S2F (ATGCGATACTTGGTGTGAAT) rbcLa-F (ATGTCACCACAAACAGAGACTAAAGC) Primers Reverse: ITS4 (TCCTCCGCTTATTGATATGC) rbcLa-R (GTAAAATCAAGTCCACCRCG)
Sequence Run Site: Centre for Biodiversity Genomics
AAGTGTTGGATTTAAAGCTGGTGTTAAAGATTACAGATTGACTTATTATACTCCTGATTACGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCCGGAGTTCCCCCTGAAGAAGCGGGCGCTGCGGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTGTGGACTGATGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTACCACATCGAGGCCGTTGTTGGGGAAGAAAGTCAATTTATTGCTTATGTAGCTTATCCTTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTGGGTAATGTATTTGGTTTCAAAGCCCTACGAGCTCTACGTTTGGAGGATCTGCGAATTCCCCCTGCTTATTCCAAAACTTTCCAAGGCCCGCCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGTCGTCCCCTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCAAAAAACTACGGTAGAGCAGTTTATGAATGTCTA
Locus: rbcLa
Nucleotides: 553 bp
Sequence Upload Date: 2023-06-01

Attribution

Specimen Depository: Universite de Montpellier
Sequencing Center: Centre for Biodiversity Genomics
Photography: Aurélien Caries
Collectors: Aurelien Caries
Specimen Identification: Aurelien Caries

Identifiers

Process ID: UMAAI1955-22 Sample ID: UM_ACAZ_0097
Record Created: 2022-09-30 Museum ID:
Collection Code: UM-BOL Field ID: UM_ACAZ_0097
Deposited In: Universite de Montpellier
Associated Datasets:
Specimen Linkout:
Checksum: d0fc26810c9f4b2a73f5df2239e37174

Taxonomy

Kingdom: Plantae Subfamily: Asparagoideae
Phylum: Tracheophyta Tribe:
Class: Liliopsida Genus: Asparagus
Order: Asparagales Species: Asparagus acutifolius
Family: Asparagaceae Scientific Name Authorship: L.
BIN ID: Subspecies:
Identification Method:
Taxonomy Notes: https://www.inaturalist.org/observations/122801770
* Barcode Index Numbers (BIN): Clustered barcode sequences that create OTUs (operational taxonomic units) closely reflective of species groupings

Specimen

Voucher Status: Vouchered:Registered Collection Reproduction:
Tissue Descriptor: leaf fragment Sex:
Brief Note: Life Stage:
Detailed Notes:

Collection

Country/Ocean: France (FR) Collection Date Start: 2022-06-20
Province/State: Occitanie Collection Date End:
Region/County: Herault Coord. Source:
Sector: Montpellier Coord. Accuracy:
Exact Site: CEFE Experimental Field Elevation: 65
Habitat: Coniferous forest Elevation Accuracy:
Latitude: 43.639 Depth:
Longitude: 3.864 Depth Accuracy:
Sampling Protocol: Visual collecting
Collectors: Aurelien Caries
Collection Note:

Ecology

Realm: Palearctic
Biome: Mediterranean_Forest_Woodlands_&_Scrub_simplify-0.001_buffered-0.018
Ecoregion: Northeast_Spain_and_Southern_France_Mediterranean_forests

Publications

Electropherogram Trace Files

Under development - available shortly

Controller URLs

http://portal.boldsystems.org/record/UMAAI1955-22
http://fastapi-app:8000/api/summary?query=ids%3Aprocessid%3AUMAAI1955-22&fields=marker_code
http://fastapi-app:8000/api/query?query=ids%3Aprocessid%3AUMAAI1955-22&extent=limited
http://fastapi-app:8000/api/documents/eAHLTCm2KijKT04tLs5MsQr1dXT0NLQ0NdU1MrLOyczNLElNAQDQOQt2?length=2

AJAX URLs


                

            

        

    






    


    

        

            

                
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